DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000330 dme-miR-184* 36999 lack gccCCGCUCUCUUACUAUUCc ||: | || |||||||| ccuGGUCA-AG-AUGAUAAGu 2 19 131 149 [dm3:2R:13490822-13490840:+] 0.5264 150 7 -10.84 -0.9871 MIMAT0000343 dme-miR-280 36999 lack auaGUAAAGUAUACGU-UGCAUUUAUGu || | ||||| :| |: ||||||: gugCA-UACAUAUAUAUAUAUAAAUAUa 2 25 277 303 [dm3:2R:13490968-13490994:+] 0.5816 149 0 -10.45 -0.2846 MIMAT0000343 dme-miR-280 36999 lack auAGUAAAGUAUACGUUGCAUUUAUGu |: || ||| | :|| |||||:| auUUUUUACAUUUUUAA-AUAAAUGCa 2 26 758 783 [dm3:2R:13491449-13491474:+] 0.5427 147 0 -9.86 -0.4472 MIMAT0000343 dme-miR-280 36999 lack auaGUAAAGUAUACGUU-GCAUUUAUGu :||| |: | ||| : || |||| aaaUAUUACGAAACCAAUUAUACAUACa 2 25 411 438 [dm3:2R:13491102-13491129:+] 0.5816 127 0 -6.90 -0.2078 MIMAT0005488 dme-miR-972 36999 lack cgGAUUUAUAAGCAUAACAUGu :|:|| || ||||||| auUUGAA-AUCAAAAUUGUACu 2 21 107 127 [dm3:2R:13490798-13490818:+] 0.5264 146 7 -8.05 -0.6645 MIMAT0005488 dme-miR-972 36999 lack cggauuUAUAA-GCAUAACAUgu :|:|| : |||||| uggcgcGUGUUAUAAAUUGUAgu 3 17 385 407 [dm3:2R:13491076-13491098:+] 0.5816 123 0 -5.84 -0.1006 MIMAT0005502 dme-miR-985 36999 lack acgGGCUGGU---AACCUUGUAAAc ::||::| || | |||||| uuaUUGAUUAGAGUUUGUACAUUUa 2 20 557 581 [dm3:2R:13491248-13491272:+] 0.5427 122 6 -9.17 -0.1244 MIMAT0005502 dme-miR-985 36999 lack acgggcugguaaccuUGUAAAc |||||| aauuaguuauuuuuuACAUUUu 2 8 750 771 [dm3:2R:13491441-13491462:+] 0.5427 120 6 -4.58 -0.3134 MIMAT0005517 dme-miR-997 36999 lack acuuUGAGGAAGCUCAAACcc |:| || ||||||| guuuAUUGAUUAGAGUUUGua 3 18 555 575 [dm3:2R:13491246-13491266:+] 0.5427 137 0 -8.47 -0.1190 MIMAT0005022 dme-miR-1009 36999 lack gacuUUACAUUGU-UAAAAACUcu ||| ||::| |||||||| guuuAAUUUAGUACAUUUUUGAug 3 20 532 555 [dm3:2R:13491223-13491246:+] 0.5427 150 0 -8.39 -0.2222 MIMAT0005026 dme-miR-1013 36999 lack gcUCAAGCCGUA-------UGAAAAUa | || ||||| ||||||| auAAUUAGGCAUAAAAACAACUUUUAa 2 19 470 496 [dm3:2R:13491161-13491187:+] 0.5816 141 7 -9.46 -1.1752 MIMAT0011784 dme-miR-2279* 36999 lack uuaaaguguGUGUCUAUAAAUu :| | ||||||| agacaccuuUAAAUAUAUUUAg 2 14 54 75 [dm3:2R:13490745-13490766:+] 0.5264 145 7 -7.61 -0.9727 MIMAT0011784 dme-miR-2279* 36999 lack uuaaaGUGUGUGUCU-AUAAAUu :| |::|| | |||||| uuaaaUAAAUGCAAAUUAUUUAa 2 18 771 793 [dm3:2R:13491462-13491484:+] 0.5427 121 6 -4.75 -1.2927 MIMAT0011791 dme-miR-2283 36999 lack uaacagcauaaguACUAUAAAAg | ||||||| caagaugauaaguUUAUAUUUUu 2 11 137 159 [dm3:2R:13490828-13490850:+] 0.5264 142 7 -3.81 -1.1012 MIMAT0011791 dme-miR-2283 36999 lack uaacagcauaaguacUAUAAAAg ||||||| gacuuacccgcucgcAUAUUUUa 2 9 649 671 [dm3:2R:13491340-13491362:+] 0.5427 140 7 -5.53 -0.5520 MIMAT0012196 dme-miR-2489 36999 lack ugacGUUUAUGUUGUAUGUUAu ||| ||: ||||||||| aaacCAAUUAU-ACAUACAAUu 2 19 421 441 [dm3:2R:13491112-13491132:+] 0.5816 164 7 -12.52 -1.1331 MIMAT0012199 dme-miR-2492 36999 lack aaacuuucgagagcUGUUUUGUa |||||||| aauaagauagggaaACAAAACAc 2 10 705 727 [dm3:2R:13491396-13491418:+] 0.5427 145 7 -8.12 -1.0355 MIMAT0012199 dme-miR-2492 36999 lack aaacuuucgagagcugUUUUGUa |||||| uugauaauuaggcauaAAAACAa 2 8 467 489 [dm3:2R:13491158-13491180:+] 0.5816 120 6 -6.83 -0.1556 MIMAT0012202 dme-miR-2494* 36999 lack aaggguUAGACCACGUG-AAUg ||:| |||||| ||| aaauauAUUUAGUGCACAUUAu 2 16 64 85 [dm3:2R:13490755-13490776:+] 0.5264 127 0 -11.87 -1.0504 MIMAT0000113 dme-miR-8 36999 lack cugUAGAAAUGGACUG-UCAUAAu | :|| |::| :| |||||| aaaAAUUUAAUUUAGCGAGUAUUu 2 21 225 248 [dm3:2R:13490916-13490939:+] 0.5872 124 6 -7.05 -0.6008 MIMAT0000391 dme-miR-305 36999 lack gucucGUGGACUACUUCAUGUua ::::| || |||||| gcuuuUGUUUAAUUUAGUACAuu 3 19 526 548 [dm3:2R:13491217-13491239:+] 0.5427 130 0 -8.41 -0.1171 MIMAT0000407 dme-miR-315 36999 lack cgaaagaCUCGUUGUUAGUUUu || : : ||||||| ucaaggcGAUUUGAAAUCAAAa 2 16 99 120 [dm3:2R:13490790-13490811:+] 0.5264 143 7 -10.87 -1.0046 MIMAT0000407 dme-miR-315 36999 lack cgaaagacucguuGUUAGUUUu :|||:||| aaugcaaauuauuUAAUUAAA- 2 10 778 798 [dm3:2R:13491469-13491489:+] 0.5427 125 0 -3.55 -0.1690 MIMAT0005467 dme-miR-190 36999 lack guUGGUUCUUAUAGUUUGUAUAga |||||| |: || |||||| uuACCAAG--UG-CAUACAUAUau 3 23 270 290 [dm3:2R:13490961-13490981:+] 0.5816 141 0 -15.22 -0.1397 MIMAT0005511 dme-miR-929 36999 lack guuagacugaggcaAUCCCUc |||||| acccaaaaauaagaUAGGGAa 2 8 698 718 [dm3:2R:13491389-13491409:+] 0.5427 120 6 -9.33 -0.1188 MIMAT0005518 dme-miR-998 36999 lack cuCGACUUAGAGUAC-CACGAu |:| ||||| || ||||| cuGUUUAAUCU--UGUGUGCUg 2 20 191 210 [dm3:2R:13490882-13490901:+] 0.5616 124 0 -15.24 -0.4308 MIMAT0005519 dme-miR-999 36999 lack ucUGUGUCAGAAUGUCAAUUgu :|::| |:||:||||||| cuGCGUA-UUUUGCAGUUAAaa 3 21 208 228 [dm3:2R:13490899-13490919:+] 0.5772 146 0 -15.70 -0.2099 MIMAT0005024 dme-miR-1011 36999 lack gacgcucgcuaaacUUGGUUAuu ||||||| uuaaaauauuacgaAACCAAUua 3 10 408 430 [dm3:2R:13491099-13491121:+] 0.5816 125 0 -9.94 -0.2732

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Smurf RAID00924191 dme-miR-1011-3p miRNA MIMAT0005024 Smurf mRNA 36999 Prediction 0.1828 Smurf RAID01258714 dme-miR-929-3p miRNA MIMAT0005511 Smurf mRNA 36999 Prediction 0.1828 Smurf RAID01557977 dme-miR-998-3p miRNA MIMAT0005518 Smurf mRNA 36999 Prediction 0.1828 Smurf RAID02201013 dme-miR-190-5p miRNA MIMAT0005467 Smurf mRNA 36999 Prediction 0.1828 Smurf RAID02588307 dme-miR-305-5p miRNA MIMAT0000391 Smurf mRNA 36999 Prediction 0.1828 Smurf RAID02720796 dme-miR-315-5p miRNA MIMAT0000407 Smurf mRNA 36999 Prediction 0.2202 Smurf RAID03833413 dme-miR-999-3p miRNA MIMAT0005519 Smurf mRNA 36999 Prediction 0.1828 Smurf RAID03907125 dme-miR-8-3p miRNA MIMAT0000113 Smurf mRNA 36999 Prediction 0.1828