DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005481 dme-miR-966 31519 CG3016 ggUGUG-UCG-GGUGUUGGGUGu |:|: ||: | : ||||||| ucAUAUAAGUACGGGAACCCACg 2 20 137 159 [dm3:X:5771304-5771326:-] 0.4572 145 7 -22.46 -0.1865 MIMAT0005018 dme-miR-1005 31519 CG3016 gacgcuuAAUUUCUAAGGUcu ||||: |||||| agauuuuUUAAGAAUUCCAaa 3 15 293 313 [dm3:X:5771150-5771170:-] 0.5892 138 0 -8.80 -0.1675 MIMAT0000338 dme-miR-277 31519 CG3016 acagcAUGGUCUAUCACGUAAAu |:::| || ||||||| ucauuUGUUAUCUA-UGCAUUUa 2 19 271 292 [dm3:X:5771171-5771192:-] 0.4965 148 7 -9.94 -1.2184 MIMAT0000341 dme-miR-279 31519 CG3016 aauUACUCACACCUAGAUCAGu :| :|| | ||||||| gucGUCGGUAUUAUUCUAGUCc 2 20 11 32 [dm3:X:5771431-5771452:-] 0.4673 147 7 -10.13 -0.9974 MIMAT0000359 dme-miR-286 31519 CG3016 ucGUGCUCACAAGCCAGAUCAGu |:: :|| || ||||||| guCGUCGGUAUU-AUUCUAGUCc 2 22 11 32 [dm3:X:5771431-5771452:-] 0.4673 147 7 -13.54 -0.9915 MIMAT0005478 dme-miR-964 31519 CG3016 uucaauucgagggGAUAAGAUu :||||||| uaggucgucgguaUUAUUCUAg 2 10 8 29 [dm3:X:5771434-5771455:-] 0.4673 141 7 -11.59 -0.5971 MIMAT0005487 dme-miR-971 31519 CG3016 agUGACAU-UCUUCA-UUG-UGGUu | |||| | || | ||| |||| gcAAUGUACACAAAUCAACUACCAa 2 21 345 369 [dm3:X:5771094-5771118:-] 0.5892 122 0 -10.11 -1.2756 MIMAT0005492 dme-miR-976 31519 CG3016 cgUAACUACUAUUG-AUUAGGUu | ||:| :| ||||||| guAAUGGUCUCCGCAUAAUCCAa 2 21 189 211 [dm3:X:5771252-5771274:-] 0.4305 143 7 -12.24 -0.5136 MIMAT0005515 dme-miR-996 31519 CG3016 ucugcUCGUACUUUAGAUCAGu :|:|| | ||||||| ucgucGGUAU-UAUUCUAGUCc 2 18 12 32 [dm3:X:5771431-5771451:-] 0.4673 147 7 -14.26 -0.9944 MIMAT0005024 dme-miR-1011 31519 CG3016 gacgcucgcuaaacuUGGUUAUu ||||||| guacacaaaucaacuACCAAUAa 2 9 350 372 [dm3:X:5771091-5771113:-] 0.5892 140 7 -8.43 -1.2505

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp30 RAID00680891 dme-miR-971-3p miRNA MIMAT0005487 Usp30 mRNA 31519 Prediction 0.1828 Usp30 RAID00779987 dme-miR-277-3p miRNA MIMAT0000338 Usp30 mRNA 31519 Prediction 0.2381 Usp30 RAID01125485 dme-miR-996-3p miRNA MIMAT0005515 Usp30 mRNA 31519 Prediction 0.2202 Usp30 RAID01134344 dme-miR-279-3p miRNA MIMAT0000341 Usp30 mRNA 31519 Prediction 0.2202 Usp30 RAID01196187 dme-miR-985-3p miRNA MIMAT0005502 Usp30 mRNA 31519 Prediction 0.1828 Usp30 RAID01626862 dme-miR-1011-3p miRNA MIMAT0005024 Usp30 mRNA 31519 Prediction 0.2202 Usp30 RAID01663582 dme-miR-964-5p miRNA MIMAT0005478 Usp30 mRNA 31519 Prediction 0.2202 Usp30 RAID02024880 dme-miR-966-5p miRNA MIMAT0005481 Usp30 mRNA 31519 Prediction 0.1828 Usp30 RAID02764152 dme-miR-286-3p miRNA MIMAT0000359 Usp30 mRNA 31519 Prediction 0.2202 Usp30 RAID02928703 dme-miR-976-3p miRNA MIMAT0005492 Usp30 mRNA 31519 Prediction 0.2202 Usp30 RAID03599308 dme-miR-11-3p miRNA MIMAT0000116 Usp30 mRNA 31519 Prediction 0.1828