DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 31748 CG15337 ucagcguccgaggugaAUUUAUAAAu ||||||||| cucaaacaauuguuaaUAAAUAUUUg 2 11 116 141 [dm3:X:8055548-8055573:+] 0.5180 150 7 -9.12 -0.8177 MIMAT0005508 dme-miR-990 31748 CG15337 ccGGUUGAGUCUUGCCACUUa ||||||| ||||||| ugCCAACUC----CGGUGAAc 2 20 72 88 [dm3:X:8055504-8055520:+] 0.5180 154 7 -23.41 -0.2581 MIMAT0011791 dme-miR-2283 31748 CG15337 uaacagcauaaguacuAUAAAAg |||||| -----------auuuuUAUUUUa 2 8 1 12 [dm3:X:8055433-8055444:+] 0.5375 120 6 -0.54 -0.1773 MIMAT0012202 dme-miR-2494* 31748 CG15337 aaggGUUAGACCACG-UGAAUg ::| |||| || ||||| ccggUGAACUGGAGCUACUUAa 2 18 80 101 [dm3:X:8055512-8055533:+] 0.5180 125 0 -16.47 -0.7305 MIMAT0012205 dme-miR-2495* 31748 CG15337 ccgcccgUAAAGUUAAUCCACGGc || ||:: ||||||| gacacugAUCUCGGCCAGGUGCCg 2 18 25 48 [dm3:X:8055457-8055480:+] 0.5180 153 7 -20.55 -0.1009 MIMAT0012531 dme-miR-10-3p 31748 CG15337 uuuggagagaucuuggCUUAAAc |||||| cuacuuaauuuuuuugGAAUUUc 2 8 94 116 [dm3:X:8055526-8055548:+] 0.5180 120 6 -11.06 -0.1239 MIMAT0000365 dme-bantam 31748 CG15337 uuagucgaaagUUUUACUAGAGu | | ||||||| uauggccaaggACACUGAUCUCg 2 13 15 37 [dm3:X:8055447-8055469:+] 0.5180 144 7 -13.45 -0.2749 MIMAT0005479 dme-miR-932 31748 CG15337 gacGUUACGUGAUGCCUUAAcu :||| : :| :|||||| acuUAAU-UUUUUUGGAAUUuc 3 20 96 116 [dm3:X:8055528-8055548:+] 0.5180 129 0 -8.37 -0.1024 MIMAT0005483 dme-miR-1002 31748 CG15337 agcGGGAAACAU-AGGU-GAUGAAUu :|| || | | | ||||||| aacUCCGGUGAACUGGAGCUACUUAa 2 22 76 101 [dm3:X:8055508-8055533:+] 0.5180 143 7 -20.44 -0.5375 MIMAT0005516 dme-miR-252 31748 CG15337 gagGACGCCG--UGA--UC-AUGAAUc || |||: ||| || |||||| caaCUCCGGUGAACUGGAGCUACUUAa 2 20 75 101 [dm3:X:8055507-8055533:+] 0.5180 121 6 -19.03 -0.7305 MIMAT0005019 dme-miR-1006 31748 CG15337 gauacuuauucuuuagCUUAAAu |||||| cuacuuaauuuuuuugGAAUUUc 2 8 94 116 [dm3:X:8055526-8055548:+] 0.5180 120 6 -2.77 -0.1251 MIMAT0005027 dme-miR-1014 31748 CG15337 gacguuuacuuuuaCUUAAAa |||||| acuuaauuuuuuugGAAUUUc 2 8 96 116 [dm3:X:8055528-8055548:+] 0.5180 120 6 -3.51 -0.1215

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG15337 RAID00513621 dme-miR-252-5p miRNA MIMAT0005516 CG15337 mRNA 31748 Prediction 0.2202 CG15337 RAID00542759 dme-miR-990-5p miRNA MIMAT0005508 CG15337 mRNA 31748 Prediction 0.1828 CG15337 RAID00572797 dme-miR-932-5p miRNA MIMAT0005479 CG15337 mRNA 31748 Prediction 0.1828 CG15337 RAID00975566 dme-miR-10-3p miRNA MIMAT0012531 CG15337 mRNA 31748 Prediction 0.1828 CG15337 RAID01121020 dme-miR-968-5p miRNA MIMAT0005484 CG15337 mRNA 31748 Prediction 0.1828 CG15337 RAID01462787 dme-miR-1006-3p miRNA MIMAT0005019 CG15337 mRNA 31748 Prediction 0.1828 CG15337 RAID01978829 dme-miR-1002-5p miRNA MIMAT0005483 CG15337 mRNA 31748 Prediction 0.2202 CG15337 RAID02255826 dme-miR-1014-3p miRNA MIMAT0005027 CG15337 mRNA 31748 Prediction 0.1828 CG15337 RAID03860119 dme-miR-978-3p miRNA MIMAT0005494 CG15337 mRNA 31748 Prediction 0.1828 CG15337 RAID03912858 dme-bantam-3p miRNA MIMAT0000365 CG15337 mRNA 31748 Prediction 0.2202