DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005021 dme-miR-1008 31845 fh acAUUUGUGUUUUUCGACACu || : | ::||||||| uaUACUUCCCUGGAGCUGUGa 2 20 146 166 [dm3:X:9042238-9042258:-] 0.4507 143 7 -15.76 -0.3314 MIMAT0005022 dme-miR-1009 31845 fh gacUUUACAUUGUUAAAAACUCu |||| | :: :|||||||| uuuAAAU-UUGUUGUUUUUGAGa 2 21 237 258 [dm3:X:9042146-9042167:-] 0.4246 158 7 -11.40 -1.0137 MIMAT0011784 dme-miR-2279* 31845 fh uuaAAG-UGUGUGUCUAUAAAUu ||| |: : | ||||||| acgUUCGAUUUUGAUAUAUUUAu 2 20 45 67 [dm3:X:9042337-9042359:-] 0.4758 146 7 -5.23 -0.9087 MIMAT0011787 dme-miR-2280* 31845 fh agucAAUCGAACCUUC--AUUUAa ||:|:|| |||| ||||| aguuUUGGUUUCGAAGUUUAAAUu 2 19 221 244 [dm3:X:9042160-9042183:-] 0.4128 122 0 -10.72 -0.5754 MIMAT0012214 dme-miR-2500* 31845 fh ccAUAACAUAUAC-ACAC--AAG-GAAUg |: | || ||| | || ||| |||| ucUGGUAUAAAUGCUUUGCAUUCGCUUAu 2 24 176 204 [dm3:X:9042200-9042228:-] 0.4318 121 0 -10.04 -0.5619 MIMAT0012215 dme-miR-2500 31845 fh gaCUCCAGGUGUG-UGUUUUAGg |||| :| || |||||| gaGAGGAAUAAACUUAAAAAUCa 2 21 255 277 [dm3:X:9042127-9042149:-] 0.4364 123 6 -14.02 -0.1775 MIMAT0012216 dme-miR-2501 31845 fh aaucggguccgugagGUUUGAAUg :||||||| uguuuuugagaggaaUAAACUUAa 2 10 248 271 [dm3:X:9042133-9042156:-] 0.4364 141 7 -11.06 -1.2176 MIMAT0005485 dme-miR-969 31845 fh uuuUGAACGA-AU-CACCUUGAg ||| | | || ||||||| gucACUCGAUAUACAUGGAACUg 2 19 92 114 [dm3:X:9042290-9042312:-] 0.4699 148 7 -9.41 -0.2349 MIMAT0005490 dme-miR-974 31845 fh uuAUGAUGAAGAAACG--AGCGAa ||: | | |||||| ||||| ggUAUAAAUGCUUUGCAUUCGCUu 2 21 179 202 [dm3:X:9042202-9042225:-] 0.4318 120 0 -15.55 -0.6791

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score fh RAID01715321 dme-miR-1009-3p miRNA MIMAT0005022 fh mRNA 31845 Prediction 0.1828 fh RAID01961522 dme-miR-974-5p miRNA MIMAT0005490 fh mRNA 31845 Prediction 0.1828 fh RAID02894922 dme-miR-2c-3p miRNA MIMAT0000411 fh mRNA 31845 Prediction 0.1828 fh RAID03172721 dme-miR-1008-3p miRNA MIMAT0005021 fh mRNA 31845 Prediction 0.1828 fh RAID03239726 dme-miR-969-5p miRNA MIMAT0005485 fh mRNA 31845 Prediction 0.2202 fh RAID03434594 dme-mir-2a-2 miRNA MI0000118 fh mRNA 31845 Prediction 0.1828