DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000330 dme-miR-184* 32765 CG15814 gccccgcucucUUACUAUUcc | |||||| aaaaaaaaucuAUUGAUAAaa 3 11 510 530 [dm3:X:17742144-17742164:-] 0.4699 122 0 -2.03 -0.2140 MIMAT0000363 dme-miR-288 32765 CG15814 guACUUUACUUUAG--C-UGUACUUu | ::|| ||:|| | ||||||| cuUCGGAUUAAGUCCUGCACAUGAAa 2 22 50 75 [dm3:X:17742599-17742624:-] 0.5185 155 7 -11.43 -0.4470 MIMAT0000363 dme-miR-288 32765 CG15814 guacuuuacuuUAGCUGUACUUu ||: ||||||| uccacgacuccAUU-ACAUGAAc 2 13 180 201 [dm3:X:17742473-17742494:-] 0.4485 142 7 -6.35 -0.2842 MIMAT0005464 dme-miR-iab-4as-3p 32765 CG15814 auUUGCAUAUGACUUACAUAGg ||: | : | ||||||| gcAAUUUUGGAUAUAUGUAUCu 2 21 351 372 [dm3:X:17742302-17742323:-] 0.5332 144 7 -9.68 -1.1859 MIMAT0005489 dme-miR-973 32765 CG15814 uuUUAGCUUCAAGUUG--G--UGGUUGGu :|| ||: |||| | ||||||| acGAUGGAGAAACAACGACAGACCAACCu 2 24 92 120 [dm3:X:17742554-17742582:-] 0.4595 149 7 -19.99 -0.1130 MIMAT0011791 dme-miR-2283 32765 CG15814 uaaCAGCAUAA--G-UACUAUAAAAg || |||| | || |||||| uagGUAUUAUUACCAAUUUUAUUUUc 2 21 436 461 [dm3:X:17742213-17742238:-] 0.5655 122 6 -8.05 -0.1485 MIMAT0000114 dme-miR-9a 32765 CG15814 aguaugucgAUCUAU-UGGUUUcu || ||| |||||| uuaggaauaUACAUAUACCAAAaa 3 15 491 514 [dm3:X:17742160-17742183:-] 0.4699 133 0 -8.15 -0.2371 MIMAT0000120 dme-miR-14 32765 CG15814 aucCU-CUCUCU-UUUUCU-GACu || || :|| :||||| ||| gacGAUGACGGAUGAAAGAUCUGu 2 19 214 237 [dm3:X:17742437-17742460:-] 0.4375 120 0 -11.46 -0.2192 MIMAT0000341 dme-miR-279 32765 CG15814 aauuacucacaCCUAGAUCAGu | :||||||| agcuuuccucgGCGUCUAGUCa 2 12 18 39 [dm3:X:17742635-17742656:-] 0.5185 143 7 -15.13 -0.3209 MIMAT0000352 dme-miR-79 32765 CG15814 uacgaaaccauuaGAUCGAAAu |||||||| ccugauaccggcaCUAGCUUUc 2 10 3 24 [dm3:X:17742650-17742671:-] 0.6315 145 7 -11.11 -0.7095 MIMAT0000359 dme-miR-286 32765 CG15814 ucGUGCUC-ACA--AGC--CAGAUCAGu ||| || | | ||| |||||||| ggCACUAGCUUUCCUCGGCGUCUAGUCa 2 22 12 39 [dm3:X:17742635-17742662:-] 0.5185 154 7 -23.29 -0.3182 MIMAT0000392 dme-miR-9c 32765 CG15814 agaugucgAUCU-UAUGGUUUcu || | |||||||| uaggaauaUACAUAUACCAAAaa 3 15 492 514 [dm3:X:17742160-17742182:-] 0.4699 133 0 -8.34 -0.2371 MIMAT0000395 dme-miR-9b 32765 CG15814 guaugucgAUUUUAGUGGUUUcu || | :|||||| uaggaauaUACAUAUACCAAAaa 3 16 492 514 [dm3:X:17742160-17742182:-] 0.4699 127 0 -8.49 -0.2371 MIMAT0000412 dme-miR-iab-4-5p 32765 CG15814 aguccUAUGUAAGUCAUAUGCa || :|| :| |||||| ucuauAUCUAUAUAUUAUACGu 2 18 370 391 [dm3:X:17742283-17742304:-] 0.5592 129 6 -9.32 -0.1054 MIMAT0005463 dme-miR-iab-4as-5p 32765 CG15814 gccAUAUGGA-A-GUCAUAUGCAUu ||||:|| | :| |||||||| aucUAUAUCUAUAUAUUAUACGUAg 2 21 369 393 [dm3:X:17742281-17742305:-] 0.5592 166 7 -15.88 -0.9709 MIMAT0005483 dme-miR-1002 32765 CG15814 agcggGAAACAUAGGUGAUGAAUu :||| | : :|||||| uuuuaUUUUCUUGAUUUUACUUAa 2 20 452 475 [dm3:X:17742199-17742222:-] 0.5177 131 6 -9.63 -0.1370 MIMAT0005497 dme-miR-981 32765 CG15814 acguccaaagcagcUGUUGCUu ||||||| acgacgauggagaaACAACGAc 2 9 89 110 [dm3:X:17742564-17742585:-] 0.4890 140 7 -14.41 -0.3579 MIMAT0005504 dme-miR-987 32765 CG15814 guaguuAGGUCUGAUAAAUGAAau ||: ||: ||||||| uuauuuUCUUGAU--UUUACUUaa 3 19 454 475 [dm3:X:17742199-17742220:-] 0.5177 131 0 -7.29 -0.1033 MIMAT0005515 dme-miR-996 32765 CG15814 ucugcucguaCUUUAGAUCAGu |: :||||||| agcuuuccucGGCGUCUAGUCa 2 13 18 39 [dm3:X:17742635-17742656:-] 0.5185 144 7 -16.08 -0.3156 MIMAT0005516 dme-miR-252 32765 CG15814 gaggacgccgugaucAUGAAUc |||||| uuauuuucuugauuuUACUUAa 2 8 454 475 [dm3:X:17742199-17742220:-] 0.5177 120 6 -7.78 -0.1411 MIMAT0005027 dme-miR-1014 32765 CG15814 gacgUUUACUUUUAC-UUAAAa ||| | ||||| ||||| aucgAAACGUAAAUGCAAUUUu 2 18 337 358 [dm3:X:17742316-17742337:-] 0.5073 133 0 -7.48 -0.8956

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG15814 RAID00114405 dme-miR-9b-5p miRNA MIMAT0000395 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID00208405 dme-miR-1014-3p miRNA MIMAT0005027 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID00389742 dme-miR-9c-5p miRNA MIMAT0000392 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID00528469 dme-miR-279-3p miRNA MIMAT0000341 CG15814 mRNA 32765 Prediction 0.2381 CG15814 RAID00763469 dme-miR-305-5p miRNA MIMAT0000391 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID00786017 dme-miR-33-5p miRNA MIMAT0000342 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID00817968 dme-miR-987-5p miRNA MIMAT0005504 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID01031341 dme-miR-iab-4-5p miRNA MIMAT0000412 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID01275973 dme-miR-286-3p miRNA MIMAT0000359 CG15814 mRNA 32765 Prediction 0.2381 CG15814 RAID01711521 dme-miR-973-5p miRNA MIMAT0005489 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID02265675 dme-miR-9a-5p miRNA MIMAT0000114 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID02549507 dme-miR-252-5p miRNA MIMAT0005516 CG15814 mRNA 32765 Prediction 0.2202 CG15814 RAID02937027 dme-miR-79-3p miRNA MIMAT0000352 CG15814 mRNA 32765 Prediction 0.2202 CG15814 RAID03164391 dme-miR-996-3p miRNA MIMAT0005515 CG15814 mRNA 32765 Prediction 0.2455 CG15814 RAID03201394 dme-mir-iab-4 miRNA MI0000432 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID03509265 dme-miR-981-3p miRNA MIMAT0005497 CG15814 mRNA 32765 Prediction 0.2202 CG15814 RAID03711697 dme-miR-14-3p miRNA MIMAT0000120 CG15814 mRNA 32765 Prediction 0.1828 CG15814 RAID03981479 dme-miR-1002-5p miRNA MIMAT0005483 CG15814 mRNA 32765 Prediction 0.2202 CG15814 RAID04053804 dme-miR-iab-8-5p miRNA MIMAT0005463 CG15814 mRNA 32765 Prediction 0.1828