DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 32819 CG6179 auaguaaagUAUACGUUGCAUUUAUGu | | ||| ||||||| uaaauaggaAAAAACAAAAUAAAUACa 2 19 204 230 [dm3:X:18275470-18275496:+] 0.4781 150 7 -9.99 -1.2381 MIMAT0005464 dme-miR-iab-4as-3p 32819 CG6179 auuugcauaugacuUACAUAGg :|||||| auuuuaaaacaauuGUGUAUCa 2 9 97 118 [dm3:X:18275363-18275384:+] 0.4602 124 6 -9.20 -0.2692 MIMAT0005489 dme-miR-973 32819 CG6179 uuuUAGCUUCAAGU-UGGUG-GUUGGu | :|| ||: ||||| ||||| uacACUGAUACUCGUACCACACAACCa 2 23 227 253 [dm3:X:18275493-18275519:+] 0.4781 125 0 -21.38 -0.9976 MIMAT0012199 dme-miR-2492 32819 CG6179 aaacuuUCGAGAG--CU---GUUUUGUa | :|||| || :|||||| ucaauuAUUUCUCCAGAUUUUAAAACAa 2 18 81 108 [dm3:X:18275347-18275374:+] 0.4560 127 6 -8.84 -0.2223 MIMAT0012215 dme-miR-2500 32819 CG6179 gacuccaggUGUGUGUUUUAgg | | ||||||| uaaauaggaAAAAACAAAAUaa 3 14 204 225 [dm3:X:18275470-18275491:+] 0.4781 129 0 -7.46 -0.1646 MIMAT0012531 dme-miR-10-3p 32819 CG6179 uuuggagagaucuugGCUUAAAc ||||||| -------------gaCGAAUUUa 2 9 1 10 [dm3:X:18275267-18275276:+] 0.3227 140 7 -7.54 -0.4364 MIMAT0000335 dme-miR-219 32819 CG6179 guUC-UUAACG--CAAACCUGUUAGu || | | || |||| |||||| uuAGCACUAGCUAGUUUAAACAAUCa 2 22 58 83 [dm3:X:18275324-18275349:+] 0.4560 127 6 -11.60 -0.2273 MIMAT0005484 dme-miR-968 32819 CG6179 guugggaaaUUACCUAUG-AUGAAu |:|| |||| ||||| gcaagacgaAGUGCAUACAUACUUa 2 16 175 199 [dm3:X:18275441-18275465:+] 0.4800 127 0 -15.24 -1.1665 MIMAT0005019 dme-miR-1006 32819 CG6179 gauacuuauucuuuaGCUUAAAu ||||||| -------------gaCGAAUUUa 2 9 1 10 [dm3:X:18275267-18275276:+] 0.3227 140 7 -8.95 -0.4364

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG6179 RAID00711091 dme-miR-87-3p miRNA MIMAT0000361 CG6179 mRNA 32819 Prediction 0.1828 CG6179 RAID01399187 dme-miR-1014-3p miRNA MIMAT0005027 CG6179 mRNA 32819 Prediction 0.1828 CG6179 RAID01495652 dme-miR-1006-3p miRNA MIMAT0005019 CG6179 mRNA 32819 Prediction 0.2202 CG6179 RAID02669168 dme-miR-10-3p miRNA MIMAT0012531 CG6179 mRNA 32819 Prediction 0.1828 CG6179 RAID03317307 dme-miR-968-5p miRNA MIMAT0005484 CG6179 mRNA 32819 Prediction 0.1828 CG6179 RAID03642048 dme-miR-219-5p miRNA MIMAT0000335 CG6179 mRNA 32819 Prediction 0.2202