DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000117 dme-miR-12 32881 CG7288 uggucaUGGACU--ACAUUA-UGAGu |||||| | |||| |||| ---uccACCUGACUUUUAAUAACUCc 2 18 1 23 [dm3:X:18753988-18754010:+] 0.4588 128 0 -13.70 -1.0914 MIMAT0000330 dme-miR-184* 32881 CG7288 gccccgcucucuUACUAUUcc ||||||| uuaacaaacuccAUGAUAAaa 3 10 38 58 [dm3:X:18754025-18754045:+] 0.4588 125 0 -3.91 -0.1624 MIMAT0005026 dme-miR-1013 32881 CG7288 gcucaAGCCGUA-UGAAAAUa || | | ||||||| -----UCCACCUGACUUUUAa 2 16 1 16 [dm3:X:18753988-18754003:+] 0.4588 142 7 -5.18 -1.3177 MIMAT0000345 dme-miR-281 32881 CG7288 uguuucucucgUUAAGGUACUGu || |||||||: uucgguuaacaAACUCCAUGAUa 2 13 33 55 [dm3:X:18754020-18754042:+] 0.4588 136 0 -14.36 -0.2309 MIMAT0005519 dme-miR-999 32881 CG7288 ucugUGUCAGAAUGUCAAUUGu || | || |:|||||| ccuaACUAUAUUUCGGUUAACa 2 19 22 43 [dm3:X:18754009-18754030:+] 0.4588 142 6 -13.13 -0.1584

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp39 RAID00516481 dme-miR-999-3p miRNA MIMAT0005519 Usp39 mRNA 32881 Prediction 0.2202 Usp39 RAID02105606 dme-miR-281-3p miRNA MIMAT0000345 Usp39 mRNA 32881 Prediction 0.1828 Usp39 RAID02125733 dme-miR-1013-3p miRNA MIMAT0005026 Usp39 mRNA 32881 Prediction 0.1828