DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0011788 dme-miR-2281* 32932 CG12200 aacgUAGACGUCGACGUCUAUUa || | || ||||||: cccaAUAUAAAGAACCAGAUAGa 2 20 92 114 [dm3:X:19369927-19369949:+] 0.5096 131 0 -9.68 -0.1695 MIMAT0000335 dme-miR-219 32932 CG12200 guucuuaacgcaaaccUGUUAGu |||||| cauaaacggaaauauaACAAUCu 2 8 214 236 [dm3:X:19370049-19370071:+] 0.5149 120 6 -7.16 -0.1313 MIMAT0000348 dme-miR-284 32932 CG12200 guuaaCGACCUUAGUUCAACGACU-GAAGu | | |||:|:||| :||| |||| cuaacGAUUCAAUUAGGUU-UUGACCUUCc 2 25 55 83 [dm3:X:19369890-19369918:+] 0.5096 134 0 -16.35 -0.9736 MIMAT0000352 dme-miR-79 32932 CG12200 uacgaaaccAUUAGAUCGAAau || |:|||||| auaacaaucUACUUUAGCUUac 3 14 227 248 [dm3:X:19370062-19370083:+] 0.5203 133 0 -7.74 -0.1794 MIMAT0005478 dme-miR-964 32932 CG12200 uucaAUUCGAGGGGAUAAGAUu | | | :|| ||||||| cuaaUUAUCAUCCGUAUUCUAu 2 19 137 158 [dm3:X:19369972-19369993:+] 0.5096 154 7 -11.90 -0.6934 MIMAT0005479 dme-miR-932 32932 CG12200 gacGUUACGUGAUG-CCUUAAcu :||| : :||: |||||| guaUAAUUUUUUAUAGGAAUUcu 3 20 16 38 [dm3:X:19369851-19369873:+] 0.5304 134 0 -8.18 -0.1770 MIMAT0005483 dme-miR-1002 32932 CG12200 agcgggaaACAUAGGU-GAUGAAuu | || | | |||||| aacggaaaUAUAACAAUCUACUUua 3 17 218 242 [dm3:X:19370053-19370077:+] 0.5149 127 0 -8.60 -0.2316 MIMAT0005484 dme-miR-968 32932 CG12200 guugggaaauuaccuaUGAUGAAu |:||||| --------ucacuccaAUUACUUg 2 9 1 16 [dm3:X:19369836-19369851:+] 0.5304 124 0 -9.17 -0.1394 MIMAT0005484 dme-miR-968 32932 CG12200 guugggaaauuaccuauGAUGAAu |||||| aacggaaauauaacaauCUACUUu 2 8 218 241 [dm3:X:19370053-19370076:+] 0.5149 120 6 -9.28 -0.2101 MIMAT0005501 dme-miR-927 32932 CG12200 ccauuucgcAUCCUUAAGAUUu |||||||||||| aauuuuuuaUAGGAAUUCUAAg 2 14 20 41 [dm3:X:19369855-19369876:+] 0.5304 165 7 -17.25 -0.8674 MIMAT0005504 dme-miR-987 32932 CG12200 guagUUAGGUCUGAUAAAUGAAAu ||| :| || || |||||| cggaAAUAUA-ACAAUCUACUUUa 2 21 220 242 [dm3:X:19370055-19370077:+] 0.5149 134 6 -8.69 -0.3060 MIMAT0005504 dme-miR-987 32932 CG12200 guaguuaGGUCUGAUAAAUGAAau :|| | | |||||| -------UCACUCCAAUUACUUgu 3 18 1 17 [dm3:X:19369836-19369852:+] 0.5304 129 0 -7.33 -0.4730

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG12200 RAID00161102 dme-miR-987-5p miRNA MIMAT0005504 CG12200 mRNA 32932 Prediction 0.2202 CG12200 RAID01985115 dme-miR-927-5p miRNA MIMAT0005501 CG12200 mRNA 32932 Prediction 0.2202 CG12200 RAID01993446 dme-miR-932-5p miRNA MIMAT0005479 CG12200 mRNA 32932 Prediction 0.1828 CG12200 RAID02308389 dme-miR-79-3p miRNA MIMAT0000352 CG12200 mRNA 32932 Prediction 0.1828 CG12200 RAID02434389 dme-miR-1005-3p miRNA MIMAT0005018 CG12200 mRNA 32932 Prediction 0.1828 CG12200 RAID02530324 dme-miR-968-5p miRNA MIMAT0005484 CG12200 mRNA 32932 Prediction 0.1828 CG12200 RAID02583278 dme-miR-284-3p miRNA MIMAT0000348 CG12200 mRNA 32932 Prediction 0.1828 CG12200 RAID03387583 dme-miR-1002-5p miRNA MIMAT0005483 CG12200 mRNA 32932 Prediction 0.1828 CG12200 RAID03676854 dme-miR-219-5p miRNA MIMAT0000335 CG12200 mRNA 32932 Prediction 0.1828 CG12200 RAID03865854 dme-miR-964-5p miRNA MIMAT0005478 CG12200 mRNA 32932 Prediction 0.2202