DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005481 dme-miR-966 33180 CG3436 ggugugucgggugUUGGGUGu ||||||| aagcgauuauugaAACCCACg 2 9 24 44 [dm3:2L:157565-157585:+] 0.3974 140 7 -16.29 -0.7623 MIMAT0012196 dme-miR-2489 33180 CG3436 ugacguuUAUGU-UGUAUGUUAu ||:|| |||||||| gcuaucuAUGCAUUCAUACAAUa 2 16 41 63 [dm3:2L:156601-156623:+] 0.4386 154 7 -15.52 -0.5815 MIMAT0012200 dme-miR-2493* 33180 CG3436 accgacacacacACACACUcg ||||||| auuuggaauaaaUGUGUGAua 3 10 2 22 [dm3:2L:156562-156582:+] 0.5843 125 0 -9.82 -0.1605 MIMAT0000106 dme-miR-2a 33180 CG3436 cgaguaguuucgaccgACACUAu |||||| -aauuuggaauaaaugUGUGAUa 2 8 1 22 [dm3:2L:156561-156582:+] 0.5843 120 6 -10.64 -0.2004 MIMAT0000107 dme-miR-2b 33180 CG3436 cgaggaguuucgaccgACACUAu |||||| -aauuuggaauaaaugUGUGAUa 2 8 1 22 [dm3:2L:156561-156582:+] 0.5843 120 6 -10.07 -0.2004 MIMAT0000111 dme-miR-6 33180 CG3436 uuuuucuugucggugACACUAu |||||| aauuuggaauaaaugUGUGAUa 2 8 1 22 [dm3:2L:156561-156582:+] 0.5843 120 6 -11.44 -0.1949 MIMAT0000116 dme-miR-11 33180 CG3436 cguucuugagucugACACUAc |||||| auuuggaauaaaugUGUGAUa 2 8 2 22 [dm3:2L:156562-156582:+] 0.5843 120 6 -8.28 -0.1985 MIMAT0000118 dme-miR-13a 33180 CG3436 ugaguaguuuuaccgACACUAu |||||| aauuuggaauaaaugUGUGAUa 2 8 1 22 [dm3:2L:156561-156582:+] 0.5843 120 6 -10.69 -0.1985 MIMAT0000119 dme-miR-13b 33180 CG3436 ugagcaguuuuaccgACACUAu |||||| aauuuggaauaaaugUGUGAUa 2 8 1 22 [dm3:2L:156561-156582:+] 0.5843 120 6 -15.05 -0.1985 MIMAT0000399 dme-miR-308 33180 CG3436 gaguGUCAUAUUAGGACACUAa ::| |||| : |||||| aauuUGGAAUAAAUGUGUGAUa 2 19 1 22 [dm3:2L:156561-156582:+] 0.5843 130 6 -8.61 -0.1949 MIMAT0000411 dme-miR-2c 33180 CG3436 cggguaguuucgaccgACACUAu |||||| -aauuuggaauaaaugUGUGAUa 2 8 1 22 [dm3:2L:156561-156582:+] 0.5843 120 6 -10.40 -0.2004 MIMAT0005016 dme-miR-1003 33180 CG3436 gacacUUAUACAUUUACAC-UCu |:||| ||||||| || aauaaAGUAU-AAAAUGUGUAGa 2 18 102 123 [dm3:2L:157643-157664:+] 0.4330 123 0 -11.60 -0.6249

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG3436 RAID00377841 dme-miR-963-5p miRNA MIMAT0005477 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID00928069 dme-miR-13a-3p miRNA MIMAT0000118 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID01206713 dme-miR-13b-3p miRNA MIMAT0000119 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID01630142 dme-miR-6-3p miRNA MIMAT0000111 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID02339391 dme-miR-2c-3p miRNA MIMAT0000411 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID03086214 dme-miR-2a-3p miRNA MIMAT0000106 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID03192167 dme-miR-966-5p miRNA MIMAT0005481 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID03212823 dme-miR-308-3p miRNA MIMAT0000399 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID03386232 dme-miR-2b-3p miRNA MIMAT0000107 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID03430223 dme-miR-11-3p miRNA MIMAT0000116 CG3436 mRNA 33180 Prediction 0.1828 CG3436 RAID03577442 dme-miR-1003-3p miRNA MIMAT0005016 CG3436 mRNA 33180 Prediction 0.1828