DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 33651 CG15439 auAGUAAA--GUAUACGUUGCAUUUAUGu |:|||| ||||| :| ||||||| agUUAUUUAACAUAUUUA---UAAAUACa 2 26 169 194 [dm3:2L:4449322-4449347:-] 0.4012 164 7 -12.52 -1.2474 MIMAT0000364 dme-miR-289 33651 CG15439 ucagcguCCGAG---GUGAAUU-UAUAAAu ||||| :|:|||| |||||| auuguucGGCUCAGUUAUUUAACAUAUUUa 2 20 157 186 [dm3:2L:4449330-4449359:-] 0.4012 134 6 -18.42 -1.2256 MIMAT0005488 dme-miR-972 33651 CG15439 cggauuuauaagcauAACAUGu |||||| auuuuuacguagauuUUGUACc 2 8 12 33 [dm3:2L:4449483-4449504:-] 0.4736 120 6 -8.90 -0.1117 MIMAT0005502 dme-miR-985 33651 CG15439 acgggcugguaaccuUGUAAAc |||||| aacauauuuauaaauACAUUUa 2 8 177 198 [dm3:2L:4449318-4449339:-] 0.4175 120 6 -4.37 -0.4391 MIMAT0011784 dme-miR-2279* 33651 CG15439 uuaaAGUGUGUGUCUAUAAAUu || |:::| |||||||| uaggUC-CGUGC-GAUAUUUAc 2 19 45 64 [dm3:2L:4449452-4449471:-] 0.4320 150 7 -11.33 -0.4213 MIMAT0011784 dme-miR-2279* 33651 CG15439 uuaaAGUGUGUGUCUAUAAAUu |:|: :| | ||||||| ucagUUAUUUA-ACAUAUUUAu 2 19 167 187 [dm3:2L:4449329-4449349:-] 0.4012 148 7 -6.85 -0.8591 MIMAT0011790 dme-miR-2282 33651 CG15439 uaaGAUAAAAAUCGAGUGGCUa | || | | |:||||| aaaCCAUAUAAAUAUUACCGAa 2 20 206 227 [dm3:2L:4449289-4449310:-] 0.4380 131 0 -9.65 -0.1564 MIMAT0012196 dme-miR-2489 33651 CG15439 ugacGUUUAUGU-UGUAUGUUAu || || :| | ||||| | uuaaCAUAUUUAUAAAUACAUUu 2 19 175 197 [dm3:2L:4449319-4449341:-] 0.4012 121 0 -5.77 -0.1373 MIMAT0012199 dme-miR-2492 33651 CG15439 aaacuuuCGAGAGCUGUUUUGua | | |: ||||||| uccgugcGAUAUUUACAAAACua 3 17 49 71 [dm3:2L:4449445-4449467:-] 0.4320 132 0 -7.12 -0.2036 MIMAT0012199 dme-miR-2492 33651 CG15439 aaacUUUCGA--GAGCUGUUUUGUa ||| :| | ||||||:| aacuAAAAUUGAAUACACAAAAUAa 2 20 67 91 [dm3:2L:4449425-4449449:-] 0.4320 130 0 -6.87 -0.1022 MIMAT0012215 dme-miR-2500 33651 CG15439 gacuccaggUGUGUGUUUUAgg |:||||||||| uaaaauugaAUACACAAAAUaa 3 14 70 91 [dm3:2L:4449425-4449446:-] 0.4320 141 0 -12.96 -0.2443 MIMAT0000105 dme-miR-1 33651 CG15439 gagguaugaagaaaUGUAAGgu |||||| aaaauaaguaagacACAUUCau 3 9 90 111 [dm3:2L:4449405-4449426:-] 0.4166 120 0 -5.78 -0.1062 MIMAT0000319 dme-miR-263a 33651 CG15439 cacuuaagaAGGUCACGGUAAUUg |:: || ||||||| uuacguagaUUUUGUACCAUUAAu 2 16 16 39 [dm3:2L:4449477-4449500:-] 0.4736 151 7 -10.25 -1.0455 MIMAT0000332 dme-miR-274 33651 CG15439 uaaugggcaaucacagccaGUGUUUu |||||| acaaaacuaaaauugaauaCACAAAa 2 8 63 88 [dm3:2L:4449428-4449453:-] 0.4320 120 6 -12.83 -0.3686 MIMAT0000347 dme-miR-283 33651 CG15439 ucuUAAU---GGU-CGACUAUAAAu |||| ||: || ||||||| aucAUUAGGUCCGUGC-GAUAUUUa 2 19 40 63 [dm3:2L:4449453-4449476:-] 0.4528 146 7 -14.43 -0.7239 MIMAT0000347 dme-miR-283 33651 CG15439 ucuuaauggucgacUAUAAAu |||||| cucaguuauuuaacAUAUUUa 2 8 166 186 [dm3:2L:4449330-4449350:-] 0.4012 120 6 -6.40 -0.2172 MIMAT0005467 dme-miR-190 33651 CG15439 guUGGUUCUUAUAGUUUGUAUAGa :|: || |||: |||||||: cgGCUCAG-UUAUUUAACAUAUUu 2 23 163 185 [dm3:2L:4449331-4449353:-] 0.4012 144 0 -14.39 -0.1094 MIMAT0005468 dme-miR-193 33651 CG15439 caaccCUGAAUCAUCCG-GUCAu || ||: | ||| |||| ucgcuGAAUUGUUCGGCUCAGUu 2 18 150 172 [dm3:2L:4449344-4449366:-] 0.4012 121 0 -10.70 -0.7361 MIMAT0005476 dme-miR-962 33651 CG15439 cugucGUAGUUAAAGAGAUGG-AAUa |:| :|||| | |||| ||| uuuuaCGUAGAUUU-UGUACCAUUAa 2 21 14 38 [dm3:2L:4449478-4449502:-] 0.4736 126 0 -9.83 -1.1256

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG15439 RAID00539663 dme-miR-985-3p miRNA MIMAT0005502 CG15439 mRNA 33651 Prediction 0.1828 CG15439 RAID00858598 dme-miR-193-3p miRNA MIMAT0005468 CG15439 mRNA 33651 Prediction 0.1828 CG15439 RAID00877481 dme-miR-263a-5p miRNA MIMAT0000319 CG15439 mRNA 33651 Prediction 0.1828 CG15439 RAID01210773 dme-miR-283-5p miRNA MIMAT0000347 CG15439 mRNA 33651 Prediction 0.1828 CG15439 RAID02573612 dme-miR-190-5p miRNA MIMAT0005467 CG15439 mRNA 33651 Prediction 0.1828 CG15439 RAID03105668 dme-miR-962-5p miRNA MIMAT0005476 CG15439 mRNA 33651 Prediction 0.1828 CG15439 RAID03177513 dme-miR-1-3p miRNA MIMAT0000105 CG15439 mRNA 33651 Prediction 0.1828 CG15439 RAID03817181 dme-miR-274-5p miRNA MIMAT0000332 CG15439 mRNA 33651 Prediction 0.1828