DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 33950 CG11321 auaGUAAAGUAUACGUUGCAUUUAUGu ||||| ||: | ||| |||||| acgCAUUU-AUG-GAAAC-GAAAUACa 2 25 68 91 [dm3:2L:6767120-6767143:-] 0.5812 134 6 -17.55 -0.1333 MIMAT0000114 dme-miR-9a 33950 CG11321 aguaugucgaucuauUGGUUUCu ||||||| -------gcccaaccACCAAAGa 2 9 1 16 [dm3:2L:6767195-6767210:-] 0.5812 140 7 -10.48 -1.0675 MIMAT0000338 dme-miR-277 33950 CG11321 acaGCAUGGUCUAUCACGUAAAu | || || || |||||| aagCCUA-CAAUUAACGCAUUUa 2 21 55 76 [dm3:2L:6767135-6767156:-] 0.5812 122 6 -8.26 -0.2079 MIMAT0000392 dme-miR-9c 33950 CG11321 agaugucgaucuuaUGGUUUCu ||||||| ------gcccaaccACCAAAGa 2 9 1 16 [dm3:2L:6767195-6767210:-] 0.5812 140 7 -11.81 -1.0675 MIMAT0000395 dme-miR-9b 33950 CG11321 guaugucgauuUUAGUGGUUUCu || |||||||| -------gcccAACCACCAAAGa 2 13 1 16 [dm3:2L:6767195-6767210:-] 0.5812 152 7 -13.78 -1.0623 MIMAT0000407 dme-miR-315 33950 CG11321 cgAAAGACUCGUUG--UUA-GUUUu ||| || | ||| ||| |||| caUUUAUG-GAAACGAAAUACAAAa 2 21 71 94 [dm3:2L:6767117-6767140:-] 0.5812 121 0 -6.76 -0.9727

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG11321 RAID00071122 dme-miR-1014-3p miRNA MIMAT0005027 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID00112819 dme-miR-219-5p miRNA MIMAT0000335 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID00272666 dme-miR-9c-5p miRNA MIMAT0000392 CG11321 mRNA 33950 Prediction 0.2202 CG11321 RAID00680984 dme-miR-987-5p miRNA MIMAT0005504 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID00773597 dme-miR-976-3p miRNA MIMAT0005492 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID01318304 dme-miR-315-5p miRNA MIMAT0000407 CG11321 mRNA 33950 Prediction 0.2381 CG11321 RAID01552170 dme-miR-1009-3p miRNA MIMAT0005022 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID01571229 dme-miR-283-5p miRNA MIMAT0000347 CG11321 mRNA 33950 Prediction 0.2202 CG11321 RAID01575440 dme-miR-973-5p miRNA MIMAT0005489 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID02000335 dme-miR-iab-4-3p miRNA MIMAT0000413 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID02077079 dme-miR-966-5p miRNA MIMAT0005481 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID02136530 dme-miR-9a-5p miRNA MIMAT0000114 CG11321 mRNA 33950 Prediction 0.2202 CG11321 RAID02187780 dme-miR-972-3p miRNA MIMAT0005488 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID02464369 dme-miR-997-5p miRNA MIMAT0005517 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID02632892 dme-miR-277-3p miRNA MIMAT0000338 CG11321 mRNA 33950 Prediction 0.2202 CG11321 RAID02764226 dme-miR-982-5p miRNA MIMAT0005498 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID02776470 dme-miR-1011-3p miRNA MIMAT0005024 CG11321 mRNA 33950 Prediction 0.2202 CG11321 RAID02847610 dme-miR-303-5p miRNA MIMAT0000388 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID03057493 dme-mir-iab-4 miRNA MI0000432 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID03381738 dme-miR-1006-3p miRNA MIMAT0005019 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID03392271 dme-miR-981-3p miRNA MIMAT0005497 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID03688417 dme-miR-1013-3p miRNA MIMAT0005026 CG11321 mRNA 33950 Prediction 0.1828 CG11321 RAID04048104 dme-miR-9b-5p miRNA MIMAT0000395 CG11321 mRNA 33950 Prediction 0.2202