DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0012212 dme-miR-2499* 34118 CG8419 cgUAACGCGACUGCAGAUGCGUGc || :| | :: | ||||||| agAUCUUG-UAGUUUAUACGCACg 2 23 91 113 [dm3:2L:8209362-8209384:+] 0.4675 144 7 -17.42 -0.4886 MIMAT0012215 dme-miR-2500 34118 CG8419 gacuccagguguGUGUUUUAGg :|||||||| gauugcuaaggcUACAAAAUCc 2 11 222 243 [dm3:2L:8209493-8209514:+] 0.4969 146 7 -16.35 -0.5881 MIMAT0012215 dme-miR-2500 34118 CG8419 gacuccAGGUGUGUGUU-UUAGg | ::||||||| |||| uuacaaUGUGCACACAAUAAUCu 2 17 197 219 [dm3:2L:8209468-8209490:+] 0.4969 128 0 -15.27 -0.3604 MIMAT0000333 dme-miR-275 34118 CG8419 gcgcgcgaugaaguccAUGGACu |||||| aaaauaaacguuuuucUACCUGc 2 8 139 161 [dm3:2L:8209410-8209432:+] 0.4911 120 6 -14.38 -0.1423 MIMAT0000393 dme-miR-306 34118 CG8419 aacucucagugauucAUGGACu |||||| aaauaaacguuuuucUACCUGc 2 8 140 161 [dm3:2L:8209411-8209432:+] 0.4911 120 6 -10.54 -0.1437 MIMAT0000396 dme-let-7 34118 CG8419 ugAUAUGUUGGAUGAUGGAgu || ||: ::| |||||| aaUAAACGUUUUUCUACCUgc 3 20 141 161 [dm3:2L:8209412-8209432:+] 0.4911 139 0 -13.18 -0.1180 MIMAT0005493 dme-miR-977 34118 CG8419 aaucUGUUGCAC-----UUA-UAGAGu ||||:||| ||| ||||| auuuACAAUGUGCACACAAUAAUCUCa 2 18 195 221 [dm3:2L:8209466-8209492:+] 0.4969 120 0 -16.15 -0.7704 MIMAT0005024 dme-miR-1011 34118 CG8419 gacgcucGCUAAACUUG-GUUAUu | || || || ||||| ccauuuaCAAUGUGCACACAAUAa 2 17 193 216 [dm3:2L:8209464-8209487:+] 0.4969 120 0 -6.56 -0.8176

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG8419 RAID00028014 dme-miR-1011-3p miRNA MIMAT0005024 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID00917128 dme-miR-306-5p miRNA MIMAT0000393 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID01814665 dme-miR-275-3p miRNA MIMAT0000333 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID01855799 dme-miR-1000-5p miRNA MIMAT0005520 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID02860563 dme-bantam-3p miRNA MIMAT0000365 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID02944506 dme-miR-1-3p miRNA MIMAT0000105 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID03523820 dme-miR-977-3p miRNA MIMAT0005493 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID03536727 dme-miR-958-3p miRNA MIMAT0005471 CG8419 mRNA 34118 Prediction 0.1828 CG8419 RAID03747233 dme-let-7-5p miRNA MIMAT0000396 CG8419 mRNA 34118 Prediction 0.1828