DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000117 dme-miR-12 34752 CG9293 uggUCAUGGACUACAUUAUGAgu | |||:| | | |||||| augAUUACUU-A-G-AAUACUac 3 21 13 32 [dm3:2L:13385903-13385922:-] 0.4576 126 0 -7.61 -0.1305 MIMAT0000343 dme-miR-280 34752 CG9293 auagUAAAGUAUAC-GUUGCAU-UUAUGu || : |||| : || || ||||| ugcaAUCCUUUAUGAUUACUUAGAAUACu 2 24 2 30 [dm3:2L:13385905-13385933:-] 0.6209 122 0 -6.71 -1.3122 MIMAT0005509 dme-miR-991 34752 CG9293 ugAAAG-GUUUGAUGUUGAAAUu || | :|:| ||| |||||| gaUUACUUAGAAUACUACUUUAg 2 21 15 37 [dm3:2L:13385898-13385920:-] 0.4576 135 6 -11.05 -0.2118 MIMAT0011784 dme-miR-2279* 34752 CG9293 uuaaagugugugucuAUAAAUu |||||| aagcacaaaauuaccUAUUUAa 2 8 41 62 [dm3:2L:13385873-13385894:-] 0.4213 120 6 -8.29 -0.1163 MIMAT0000332 dme-miR-274 34752 CG9293 uaAUGG-GCAAUCACAGCCAGUGUUUu |||: | |||| |: |||||| aaUACUACUUUAG-AUUAAGCACAAAa 2 25 25 50 [dm3:2L:13385885-13385910:-] 0.4213 125 6 -12.32 -0.2251 MIMAT0000334 dme-miR-92a 34752 CG9293 uauccggcccuguucACGUUAc |||||| --------------aUGCAAUc 2 8 1 8 [dm3:2L:13385927-13385934:-] 0.7842 120 6 -4.39 -0.1041 MIMAT0000358 dme-miR-92b 34752 CG9293 cguccggcccugaucACGUUAa |||||| --------------aUGCAAUc 2 8 1 8 [dm3:2L:13385927-13385934:-] 0.7842 120 6 -4.77 -0.1041 MIMAT0000402 dme-miR-310 34752 CG9293 uuuccggcccuucacACGUUAu |||||| --------------aUGCAAUc 2 8 1 8 [dm3:2L:13385927-13385934:-] 0.7842 120 6 -4.51 -0.1041 MIMAT0000403 dme-miR-311 34752 CG9293 aguccggccacuuacACGUUAu |||||| --------------aUGCAAUc 2 8 1 8 [dm3:2L:13385927-13385934:-] 0.7842 120 6 -4.51 -0.1041 MIMAT0000404 dme-miR-312 34752 CG9293 aguccggcagaguucACGUUAu |||||| --------------aUGCAAUc 2 8 1 8 [dm3:2L:13385927-13385934:-] 0.7842 120 6 -4.51 -0.1041 MIMAT0000405 dme-miR-313 34752 CG9293 agcccgacacuuuucACGUUAu |||||| --------------aUGCAAUc 2 8 1 8 [dm3:2L:13385927-13385934:-] 0.7842 120 6 -4.51 -0.1041 MIMAT0005474 dme-miR-960 34752 CG9293 cgAUAC-GUUAGACCUUAUGAgu |||| : | :| ||||||| uuUAUGAUUACUUAGAAUACUac 3 21 10 32 [dm3:2L:13385903-13385925:-] 0.6209 139 0 -12.12 -0.3313 MIMAT0005476 dme-miR-962 34752 CG9293 cugucgUAGUUAA---AGAGAUGGAAUa ||:| || : ||||:||| uuuaugAUUACUUAGAAUACUACUUUAg 2 20 10 37 [dm3:2L:13385898-13385925:-] 0.6209 130 0 -8.87 -0.1346 MIMAT0005483 dme-miR-1002 34752 CG9293 agcGGGAAACAUAGGUGAUGAAUu :||||| |: |:|||||| caaUCCUUUAUG---AUUACUUAg 2 22 4 24 [dm3:2L:13385911-13385931:-] 0.6209 141 6 -14.63 -0.1878 MIMAT0005484 dme-miR-968 34752 CG9293 guugggaAAUUA--CCUAUGAUGAAu ||| | | ||||||||| uuuaugaUUACUUAGAAUACUACUUu 2 18 10 35 [dm3:2L:13385900-13385925:-] 0.6209 156 7 -11.89 -1.2349 MIMAT0005504 dme-miR-987 34752 CG9293 guaGUUAGGUCUGAUAAAUGAAau |||||| |: |||||| augCAAUCCUUUAUGAUUACUUag 3 22 1 24 [dm3:2L:13385911-13385934:-] 0.6209 141 0 -13.99 -0.1612 MIMAT0005516 dme-miR-252 34752 CG9293 gaggacgccgugaucAUGAAUc |||||| gcaauccuuuaugauUACUUAg 2 8 3 24 [dm3:2L:13385911-13385932:-] 0.6209 120 6 -12.43 -0.1949

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG9293 RAID00140404 dme-miR-1002-5p miRNA MIMAT0005483 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID00495389 dme-miR-960-5p miRNA MIMAT0005474 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID00859111 dme-miR-92b-3p miRNA MIMAT0000358 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID01062011 dme-miR-962-5p miRNA MIMAT0005476 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID01139361 dme-miR-92a-3p miRNA MIMAT0000334 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID01339683 dme-miR-274-5p miRNA MIMAT0000332 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID01735808 dme-miR-310-3p miRNA MIMAT0000402 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID02003272 dme-miR-311-3p miRNA MIMAT0000403 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID02278228 dme-miR-312-3p miRNA MIMAT0000404 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID02568790 dme-miR-313-3p miRNA MIMAT0000405 CG9293 mRNA 34752 Prediction 0.1828 CG9293 RAID03066188 dme-miR-987-5p miRNA MIMAT0005504 CG9293 mRNA 34752 Prediction 0.2202 CG9293 RAID03142776 dme-miR-968-5p miRNA MIMAT0005484 CG9293 mRNA 34752 Prediction 0.2202 CG9293 RAID03257239 dme-miR-252-5p miRNA MIMAT0005516 CG9293 mRNA 34752 Prediction 0.1828