DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005464 dme-miR-iab-4as-3p 36244 CG9003 auuUGCAUAUG-ACUUACAU-AGg |: ||||| | ||||| || uguAUAUAUACAUAUAUGUAGUCg 2 20 425 448 [dm3:2R:7530246-7530269:-] 0.5248 122 0 -8.60 -0.6924 MIMAT0005491 dme-miR-975 36244 CG9003 uauGUCCUACAUCCUUCACAAAu | | || || |||||||| ugcCUGUAU-UA-AAAGUGUUUg 2 21 543 563 [dm3:2R:7530131-7530151:-] 0.5314 148 7 -10.57 -0.8682 MIMAT0005025 dme-miR-1012 36244 CG9003 gauaccccuUUUAGAAACUGAUu |||| | |||||| guguuugcuAAAU-UAUGACUAa 2 15 557 578 [dm3:2R:7530116-7530137:-] 0.5213 124 6 -9.61 -0.2186 MIMAT0005026 dme-miR-1013 36244 CG9003 gcucaagccguaUGAAAAUa ||||||| acuauuaauuucACUUUUAg 2 9 726 745 [dm3:2R:7529949-7529968:-] 0.5199 140 7 -4.99 -0.4605 MIMAT0011791 dme-miR-2283 36244 CG9003 uaacAGCAUAAGUACU-AUAAAAg || ||| :||| |||||| agcaUCAAAUU-GUGAUUAUUUUa 2 20 296 318 [dm3:2R:7530376-7530398:-] 0.5536 125 6 -5.81 -1.1550 MIMAT0012199 dme-miR-2492 36244 CG9003 aaacUUUCGAGAGCUGUUUUGUa ||||| :| ||||||| ccgcAAAGCGUU---CAAAACAc 2 20 692 711 [dm3:2R:7529983-7530002:-] 0.5177 151 7 -9.90 -0.6363 MIMAT0012201 dme-miR-2493 36244 CG9003 ugCGGAGCGUGUUUAUGUG-UGCc ||| :|:|: | ||||| ||| uaGCCAUGUAU-AUUACACAACGa 2 22 800 822 [dm3:2R:7529872-7529894:-] 0.5222 127 0 -20.03 -1.0672 MIMAT0012206 dme-miR-2496* 36244 CG9003 augcuaccgGAGAGUGUGUGCGUg ||||||:||||||| uaguuuuaaCUCUCAUACACGCAu 2 16 520 543 [dm3:2R:7530151-7530174:-] 0.5281 171 7 -28.25 -0.6156 MIMAT0000109 dme-miR-4 36244 CG9003 agUUAC-CAACAGAUCGAA-AUa :||| ||| ||||||| || ccGAUGAAUUG-CUAGCUUAUAu 2 20 398 419 [dm3:2R:7530275-7530296:-] 0.5436 124 0 -15.22 -0.7998 MIMAT0005470 dme-miR-957 36244 CG9003 cgGAGUCAAAACCUGC-CAAAGu :|:| ||| :|| ||||| guUUUAAUUUAAAGCGAGUUUCa 2 21 257 279 [dm3:2R:7530415-7530437:-] 0.5449 120 0 -12.46 -1.0566 MIMAT0005472 dme-miR-375 36244 CG9003 auugaAUUCGGU-UUGCUUGUUu || || ||||||||| auguaUAUUACACAACGAACAAa 2 18 805 827 [dm3:2R:7529867-7529889:-] 0.5222 152 7 -13.81 -1.0922 MIMAT0005483 dme-miR-1002 36244 CG9003 agCGGGAAACAUAGGUGAU-GAAUu |||| || || ::||| |||| caGCCCGAUGAAU-UGCUAGCUUAu 2 23 394 417 [dm3:2R:7530277-7530300:-] 0.5436 128 0 -13.75 -0.7591 MIMAT0005487 dme-miR-971 36244 CG9003 agugacauucuuCAUUGUGGUu | ||||||| aucaucuuucccGAAACACCAa 2 11 842 863 [dm3:2R:7529831-7529852:-] 0.5222 142 7 -11.47 -0.7836 MIMAT0005492 dme-miR-976 36244 CG9003 cguaacuacUAUUGAUUAGGUu :| | ||||||| auuacccacGUCAAUAAUCCAa 2 14 866 887 [dm3:2R:7529807-7529828:-] 0.5222 145 7 -8.78 -1.1635 MIMAT0005496 dme-miR-980 36244 CG9003 auUCGGGAAGUGUUCCGUCGAu ||:| || || ||||||| guAGUCGAUC-CACGGCAGCUu 2 21 442 462 [dm3:2R:7530232-7530252:-] 0.5248 158 7 -19.87 -0.2172 MIMAT0005497 dme-miR-981 36244 CG9003 acGUCCAAAGCAGCUGUUGCUu || || | | ||||||| gcCAUGUAUAUUACACAACGAa 2 21 802 823 [dm3:2R:7529871-7529892:-] 0.5222 152 7 -10.85 -0.9067 MIMAT0005024 dme-miR-1011 36244 CG9003 gacgcucgcuaaacuuGGUUAUu |||||| uacccacgucaauaauCCAAUAa 2 8 868 890 [dm3:2R:7529804-7529826:-] 0.4923 120 6 -9.99 -0.1397

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG9003 RAID00029421 dme-miR-981-3p miRNA MIMAT0005497 CG9003 mRNA 36244 Prediction 0.2202 CG9003 RAID00163757 dme-miR-2c-3p miRNA MIMAT0000411 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID00416806 dme-miR-375-3p miRNA MIMAT0005472 CG9003 mRNA 36244 Prediction 0.2202 CG9003 RAID00423995 dme-miR-976-3p miRNA MIMAT0005492 CG9003 mRNA 36244 Prediction 0.2202 CG9003 RAID00483649 dme-miR-957-3p miRNA MIMAT0005470 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID00528974 dme-miR-317-3p miRNA MIMAT0000409 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID00561323 dme-miR-998-3p miRNA MIMAT0005518 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID00903612 dme-miR-303-5p miRNA MIMAT0000388 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID01065630 dme-miR-1002-5p miRNA MIMAT0005483 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID01160426 dme-mir-2a-2 miRNA MI0000118 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID01283277 dme-miR-1011-3p miRNA MIMAT0005024 CG9003 mRNA 36244 Prediction 0.2202 CG9003 RAID01291962 dme-miR-995-3p miRNA MIMAT0005514 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID01405292 dme-miR-1003-3p miRNA MIMAT0005016 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID01566209 dme-miR-1012-3p miRNA MIMAT0005025 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID01679934 dme-miR-1004-3p miRNA MIMAT0005017 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID01869345 dme-miR-1013-3p miRNA MIMAT0005026 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID02934766 dme-miR-285-3p miRNA MIMAT0000356 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID03187688 dme-miR-304-5p miRNA MIMAT0000390 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID03402784 dme-miR-1001-5p miRNA MIMAT0005521 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID03465588 dme-miR-4-3p miRNA MIMAT0000109 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID03651312 dme-miR-971-3p miRNA MIMAT0005487 CG9003 mRNA 36244 Prediction 0.2202 CG9003 RAID03663723 dme-miR-975-5p miRNA MIMAT0005491 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID03758418 dme-miR-316-5p miRNA MIMAT0000408 CG9003 mRNA 36244 Prediction 0.1828 CG9003 RAID03804209 dme-miR-980-3p miRNA MIMAT0005496 CG9003 mRNA 36244 Prediction 0.2202