DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000360 dme-miR-287 37245 Oseg6 caCGUUUGCUAA----A--AGUUGUGu |||||||| | | |||||| aaGCAAACGAAUAGACUGCACAACACa 2 20 22 48 [dm3:2R:15374614-15374640:-] 0.5702 121 6 -21.23 -0.1257 MIMAT0005509 dme-miR-991 37245 Oseg6 ugaaagGUUUGAUGUUGAAAUu |||| || |||||| aaugcaCAAAAUA-CACUUUAu 2 17 83 103 [dm3:2R:15374559-15374579:-] 0.5185 126 6 -9.81 -0.4057 MIMAT0012198 dme-miR-2491 37245 Oseg6 ucGUUGACGUUUCCGUUGUCGc |||| ||| ||||| | caCAAC-ACAAUCACAACACCa 2 21 40 60 [dm3:2R:15374602-15374622:-] 0.5702 122 0 -9.77 -0.1688 MIMAT0000114 dme-miR-9a 37245 Oseg6 agUAUGUCGAUCUAUUGGUUUcu | ||| : | | |||||| caACACAAUCACAACACCAAAaa 3 22 42 64 [dm3:2R:15374598-15374620:-] 0.5444 133 0 -4.93 -0.2272 MIMAT0000332 dme-miR-274 37245 Oseg6 uaaugggcaaucacagccAGUGUUuu |||||| auagacugcacaacacaaUCACAAca 3 9 32 57 [dm3:2R:15374605-15374630:-] 0.5702 120 0 -8.93 -0.1775 MIMAT0000332 dme-miR-274 37245 Oseg6 uaaugggcaaucacagccaGUGUUUu |||||| auucuuauaagcugcaaugCACAAAa 2 8 68 93 [dm3:2R:15374569-15374594:-] 0.5185 120 6 -12.20 -0.2851 MIMAT0000335 dme-miR-219 37245 Oseg6 guucuuaacgcaaaccUGUUAGu |||||| gaauagacugcacaacACAAUCa 2 8 30 52 [dm3:2R:15374610-15374632:-] 0.5702 120 6 -9.89 -0.1338 MIMAT0000342 dme-miR-33 37245 Oseg6 guuacgcUGAUGUUACGUGga :||:|||||||| cuuauaaGCUGCAAUGCACaa 3 15 71 91 [dm3:2R:15374571-15374591:-] 0.5185 142 0 -18.13 -0.2082 MIMAT0000392 dme-miR-9c 37245 Oseg6 agaUGUCGAUCUUAUGGUUUcu ||| : | || |||||| aacACAAUCACAACACCAAAaa 3 20 43 64 [dm3:2R:15374598-15374619:-] 0.5444 139 0 -5.63 -0.2272 MIMAT0000395 dme-miR-9b 37245 Oseg6 guaUGUCGAUUUUAGUGGUUUcu ||| : | || ||||||| aacACAAUCACAA-CACCAAAaa 3 21 43 64 [dm3:2R:15374598-15374619:-] 0.5444 138 0 -8.59 -0.2252 MIMAT0000405 dme-miR-313 37245 Oseg6 agcccGACACUUUUC-ACGUUAu :| | | ||| |||||| auauaUUCUUAUAAGCUGCAAUg 2 18 64 86 [dm3:2R:15374576-15374598:-] 0.5185 121 6 -8.84 -1.0259 MIMAT0005478 dme-miR-964 37245 Oseg6 uucaauucgaggggAUAAGAuu |||||| caacaccaaaaauaUAUUCUua 3 9 53 74 [dm3:2R:15374588-15374609:-] 0.5444 120 0 -6.03 -0.2583 MIMAT0005486 dme-miR-970 37245 Oseg6 uaucggcgcacacAGAAUAcu |||||| accaaaaauauauUCUUAUaa 3 9 57 77 [dm3:2R:15374585-15374605:-] 0.5444 120 0 -3.07 -0.1374 MIMAT0005487 dme-miR-971 37245 Oseg6 agugacauucuucaUUGUGGUu ||||||| cacaacacaaucacAACACCAa 2 9 40 61 [dm3:2R:15374601-15374622:-] 0.5702 140 7 -12.05 -1.1987

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Oseg6 RAID00482544 dme-miR-970-3p miRNA MIMAT0005486 Oseg6 mRNA 37245 Prediction 0.1828 Oseg6 RAID00776639 dme-miR-219-5p miRNA MIMAT0000335 Oseg6 mRNA 37245 Prediction 0.2202 Oseg6 RAID00831147 dme-miR-33-5p miRNA MIMAT0000342 Oseg6 mRNA 37245 Prediction 0.2202 Oseg6 RAID00884436 dme-miR-313-3p miRNA MIMAT0000405 Oseg6 mRNA 37245 Prediction 0.1828 Oseg6 RAID01555217 dme-miR-137-3p miRNA MIMAT0005507 Oseg6 mRNA 37245 Prediction 0.1828 Oseg6 RAID01776216 dme-miR-9a-5p miRNA MIMAT0000114 Oseg6 mRNA 37245 Prediction 0.1828 Oseg6 RAID02133632 dme-miR-274-5p miRNA MIMAT0000332 Oseg6 mRNA 37245 Prediction 0.1828 Oseg6 RAID02718346 dme-miR-971-3p miRNA MIMAT0005487 Oseg6 mRNA 37245 Prediction 0.2381 Oseg6 RAID03017959 dme-miR-9c-5p miRNA MIMAT0000392 Oseg6 mRNA 37245 Prediction 0.1828 Oseg6 RAID03690105 dme-miR-9b-5p miRNA MIMAT0000395 Oseg6 mRNA 37245 Prediction 0.1828 Oseg6 RAID03724225 dme-miR-964-5p miRNA MIMAT0005478 Oseg6 mRNA 37245 Prediction 0.1828