DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005494 dme-miR-978 38079 Rev1 gacguuaaaugccguGACCUGu |||||| -----------gaccCUGGACa 2 8 1 11 [dm3:3L:657795-657805:+] 0.5066 120 6 -12.27 -0.1210 MIMAT0012195 dme-miR-307-as 38079 Rev1 cugagUGAGUUGGACCCACAcu || | :||||||| uuagaACGGAUAUUGGGUGUca 3 18 13 34 [dm3:3L:657807-657828:+] 0.4927 129 0 -15.85 -0.1778 MIMAT0000319 dme-miR-263a 38079 Rev1 cacUUAAGAA---GGUCACGGUAAUUg |:||: | ||| | ||||||| auuAGUUUAUAAGCCA-U-CCAUUAAu 2 22 104 128 [dm3:3L:657898-657922:+] 0.4787 144 7 -11.41 -0.9004 MIMAT0000319 dme-miR-263a 38079 Rev1 cacUUAAG-AAGGUCACGGUA-AUUg ||||| |||| | |||| ||| gaaAAUUCAAUCCA-UACCAUAUAA- 2 22 158 181 [dm3:3L:657952-657975:+] 0.4787 130 0 -9.69 -1.1231 MIMAT0005479 dme-miR-932 38079 Rev1 gacguUACGUGAUGCCU-UAACu || :| ||||| |||| uggacAUUUAGAACGGAUAUUGg 2 18 6 28 [dm3:3L:657800-657822:+] 0.4927 121 0 -13.68 -0.9134 MIMAT0005492 dme-miR-976 38079 Rev1 cguaACUACUAUUGA-UUAGGUu | | || ||:| |||||| cuggUAAAGAAAAUUCAAUCCAu 2 19 150 172 [dm3:3L:657944-657966:+] 0.4787 126 6 -9.22 -0.7881 MIMAT0005496 dme-miR-980 38079 Rev1 auUCGGGAAGUGUUCC-GUCGAu |||: | |:: || ||||| caAGCUAUGAAUGCGGCCAGCUg 2 21 65 87 [dm3:3L:657859-657881:+] 0.4787 120 0 -16.64 -0.6777 MIMAT0005503 dme-miR-986 38079 Rev1 agUCAGU-GUUGCGAUAAGCUCu || || | |: : ||||||| uaAGCCAUCCAU-UAAUUCGAGc 2 21 113 134 [dm3:3L:657907-657928:+] 0.4787 145 7 -11.12 -1.0472

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rev1 RAID00075496 dme-miR-932-5p miRNA MIMAT0005479 Rev1 mRNA 38079 Prediction 0.1828 Rev1 RAID00793635 dme-miR-980-3p miRNA MIMAT0005496 Rev1 mRNA 38079 Prediction 0.1828 Rev1 RAID02244277 dme-miR-978-3p miRNA MIMAT0005494 Rev1 mRNA 38079 Prediction 0.1828 Rev1 RAID03154750 dme-miR-986-5p miRNA MIMAT0005503 Rev1 mRNA 38079 Prediction 0.2202 Rev1 RAID03617735 dme-miR-985-3p miRNA MIMAT0005502 Rev1 mRNA 38079 Prediction 0.1828 Rev1 RAID03763641 dme-miR-263a-5p miRNA MIMAT0000319 Rev1 mRNA 38079 Prediction 0.1828 Rev1 RAID03929373 dme-miR-976-3p miRNA MIMAT0005492 Rev1 mRNA 38079 Prediction 0.1828