DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005021 dme-miR-1008 38224 CG8001 acauuuguguuUUUCGACACu :|||||||| aaagcguuucuGAAGCUGUGa 2 11 81 101 [dm3:3L:1759117-1759137:+] 0.5280 146 7 -18.61 -1.1529 MIMAT0011784 dme-miR-2279* 38224 CG8001 uuaaaGUGUGUGUCUAUAAAuu :| :::|: |||||| acacaUAAGUGCGCAUAUUUua 3 18 115 136 [dm3:3L:1759151-1759172:+] 0.5384 129 0 -9.82 -0.1137 MIMAT0011791 dme-miR-2283 38224 CG8001 uaacagcaUAAGUACUAUAAAAg |||: |||||||| auuauauaAUUUUCGAUAUUUUa 2 16 48 70 [dm3:3L:1759084-1759106:+] 0.4480 155 7 -7.70 -0.7840 MIMAT0011791 dme-miR-2283 38224 CG8001 uaacaGCAUAAGUAC-UAUAAAAg | || :: | ||||||| uaacaCAUAAGUGCGCAUAUUUUa 2 19 113 136 [dm3:3L:1759149-1759172:+] 0.5384 141 7 -4.68 -0.9404 MIMAT0012204 dme-miR-2495 38224 CG8001 ucagucggguuaacUUCACGgu |||||| uaaccguaacacauAAGUGCgc 3 9 107 128 [dm3:3L:1759143-1759164:+] 0.5332 120 0 -10.64 -0.1353 MIMAT0012205 dme-miR-2495* 38224 CG8001 ccgccCGUAAAGUUAAUCCACGGc ||| || ||||||| -----GCA-CUCCCCGAGGUGCCg 2 20 1 18 [dm3:3L:1759037-1759054:+] 0.4921 141 7 -18.91 -0.5383 MIMAT0000347 dme-miR-283 38224 CG8001 ucUUAAUG-GUCGA---CUAUAAAu :||||: :| :| ||||||| gcGAUUAUAUAAUUUUCGAUAUUUu 2 20 45 69 [dm3:3L:1759081-1759105:+] 0.4480 145 7 -5.26 -0.7711 MIMAT0000361 dme-miR-87 38224 CG8001 guguggacuuuaaaACGAGUu |||||| caagguuuaauaaaUGCUCAu 2 8 145 165 [dm3:3L:1759181-1759201:+] 0.5411 120 6 -7.46 -0.1968 MIMAT0005505 dme-miR-988 38224 CG8001 cgcacuccAAACGUUGUUCCcc ||| ||||||| uauuuuauUUUUAAACAAGGuu 3 15 130 151 [dm3:3L:1759166-1759187:+] 0.5398 134 0 -7.95 -0.2756 MIMAT0005027 dme-miR-1014 38224 CG8001 gacguuuACUUU--UACUUAAAa ||||: :||||||| gcguuucUGAAGCUGUGAAUUUg 2 15 84 106 [dm3:3L:1759120-1759142:+] 0.5280 149 7 -10.41 -0.4489

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG8001 RAID01725459 dme-miR-2c-3p miRNA MIMAT0000411 CG8001 mRNA 38224 Prediction 0.2202 CG8001 RAID02301324 dme-miR-988-3p miRNA MIMAT0005505 CG8001 mRNA 38224 Prediction 0.1828 CG8001 RAID02686397 dme-miR-283-5p miRNA MIMAT0000347 CG8001 mRNA 38224 Prediction 0.1828 CG8001 RAID02730712 dme-mir-2a-2 miRNA MI0000118 CG8001 mRNA 38224 Prediction 0.1828 CG8001 RAID03000019 dme-miR-87-3p miRNA MIMAT0000361 CG8001 mRNA 38224 Prediction 0.1828 CG8001 RAID03688036 dme-miR-1014-3p miRNA MIMAT0005027 CG8001 mRNA 38224 Prediction 0.2202 CG8001 RAID03859330 dme-miR-1008-3p miRNA MIMAT0005021 CG8001 mRNA 38224 Prediction 0.1828