DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0011784 dme-miR-2279* 38472 CG1134 uuaaAGUGUGUGUC---UAUAAAUu |||:::||:| |||||| augcUCAUGUACGGCAUUUAUUUAa 2 19 66 90 [dm3:3L:4023006-4023030:+] 0.4601 125 6 -13.73 -0.1430 MIMAT0000333 dme-miR-275 38472 CG1134 gcgcgcgaugaagucCAUGGACu ||||||| caacaagaucaccuuGUACCUGu 2 9 17 39 [dm3:3L:4022957-4022979:+] 0.6165 140 7 -12.59 -0.9221 MIMAT0000338 dme-miR-277 38472 CG1134 acagcAUG-GUCUAUCACGUAAAu |:| || :|| |||||| uacaaUGCUCAUGUACGGCAUUUa 2 19 62 85 [dm3:3L:4023002-4023025:+] 0.4601 125 6 -10.64 -0.1126 MIMAT0000393 dme-miR-306 38472 CG1134 aacUCUCAGUGAUUCAUGGACu ||| |||| ||||||| acaAGA-UCACCUUGUACCUGu 2 20 19 39 [dm3:3L:4022959-4022979:+] 0.6165 157 7 -19.30 -0.9189 MIMAT0005477 dme-miR-963 38472 CG1134 cuUUGUUGGACUAUAA-AUGGA-ACa ||||| | | || ||||| || ccAACAAGAUCACCUUGUACCUGUGu 2 23 16 41 [dm3:3L:4022956-4022981:+] 0.6165 125 0 -15.15 -0.5118

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Mul1 RAID00232631 dme-miR-275-3p miRNA MIMAT0000333 Mul1 mRNA 38472 Prediction 0.2202 Mul1 RAID00339605 dme-miR-981-3p miRNA MIMAT0005497 Mul1 mRNA 38472 Prediction 0.1828 Mul1 RAID02208298 dme-miR-306-5p miRNA MIMAT0000393 Mul1 mRNA 38472 Prediction 0.2202 Mul1 RAID02962321 dme-miR-277-3p miRNA MIMAT0000338 Mul1 mRNA 38472 Prediction 0.2202 Mul1 RAID03819108 dme-miR-963-5p miRNA MIMAT0005477 Mul1 mRNA 38472 Prediction 0.1828