DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 39612 CG13472 ucagcguccGAGGUGAAUUUAUAAau ||::|| :|||||| aauaaacaaCUUUAC-AGAAUAUU-- 3 18 55 77 [dm3:3L:14782743-14782765:+] 0.5748 131 0 -7.82 -0.1453 MIMAT0005499 dme-miR-983 39612 CG13472 aguaauCAAGCUUUGCAUAAua ||| |||||||| cagccuGUUAACAACGUAUUua 3 17 14 35 [dm3:3L:14782702-14782723:+] 0.5748 136 0 -10.27 -0.3919 MIMAT0005509 dme-miR-991 39612 CG13472 ugAAAGGUUUGAUGUUGAAAUu |||| || ||||||||| ugUUUCGAAUAAACAACUUUAc 2 21 48 69 [dm3:3L:14782736-14782757:+] 0.5748 168 7 -14.30 -0.5715 MIMAT0011784 dme-miR-2279* 39612 CG13472 uuAAAGUGUGUGUCUAUAAAUu | |:| ||| | :|||||| ccUGUUA-ACA-ACGUAUUUAa 2 21 17 36 [dm3:3L:14782705-14782724:+] 0.5748 136 6 -6.22 -0.3504 MIMAT0011789 dme-miR-2281 39612 CG13472 cguuaugacgucuAUGUCUau |||||| gaauaaacaacuuUACAGAau 3 9 54 74 [dm3:3L:14782742-14782762:+] 0.5748 120 0 -6.72 -0.1343 MIMAT0012198 dme-miR-2491 39612 CG13472 ucgUUGACGUUUCCGUUGUCGc :|| | | ||:|||||| ---GACAAC-AUGGUAACAGCc 2 20 1 18 [dm3:3L:14782689-14782706:+] 0.5748 137 6 -16.58 -0.1465 MIMAT0012531 dme-miR-10-3p 39612 CG13472 uuUGGAGAGAUCUUGGCUUAAAc :||| |: | || || |||| caGCCUGUUAACAA-CGUAUUUa 2 22 14 35 [dm3:3L:14782702-14782723:+] 0.5748 127 0 -8.73 -0.1405 MIMAT0000406 dme-miR-314 39612 CG13472 ggcUUGAAU-AACCGAGCUUAu ||:| | || :|||||| aucAAUUAACAUGUUUCGAAUa 2 19 37 58 [dm3:3L:14782725-14782746:+] 0.5748 137 6 -11.23 -0.2827 MIMAT0000407 dme-miR-315 39612 CG13472 cgaaagacucguugUUAGUUuu |||||| uaacaacguauuuaAAUCAAuu 3 9 22 43 [dm3:3L:14782710-14782731:+] 0.5748 120 0 -6.59 -0.1074 MIMAT0005497 dme-miR-981 39612 CG13472 acguccaaaGCAGCUGUUGCuu :||: |||||| guaacagccUGUUAACAACGua 3 14 10 31 [dm3:3L:14782698-14782719:+] 0.5748 129 0 -15.22 -0.6891 MIMAT0005519 dme-miR-999 39612 CG13472 ucUGUGUCA--GAAUGUCAAUUGu |||::|| | | |||||| caACAUGGUAACAGCCUGUUAACa 2 21 3 26 [dm3:3L:14782691-14782714:+] 0.5748 123 6 -13.51 -0.1330

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tdrd3 RAID00369308 dme-miR-999-3p miRNA MIMAT0005519 Tdrd3 mRNA 39612 Prediction 0.2202 Tdrd3 RAID00827583 dme-miR-981-3p miRNA MIMAT0005497 Tdrd3 mRNA 39612 Prediction 0.1828 Tdrd3 RAID00956478 dme-miR-314-3p miRNA MIMAT0000406 Tdrd3 mRNA 39612 Prediction 0.2202 Tdrd3 RAID01610963 dme-miR-10-3p miRNA MIMAT0012531 Tdrd3 mRNA 39612 Prediction 0.1828 Tdrd3 RAID02121669 dme-miR-991-3p miRNA MIMAT0005509 Tdrd3 mRNA 39612 Prediction 0.1828 Tdrd3 RAID03335590 dme-miR-315-5p miRNA MIMAT0000407 Tdrd3 mRNA 39612 Prediction 0.1828 Tdrd3 RAID03444928 dme-miR-137-3p miRNA MIMAT0005507 Tdrd3 mRNA 39612 Prediction 0.1828