DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000330 dme-miR-184* 39685 CG7427 gccccgcucucUUACUAUUcc | |||||| guucuucuaucAUUGAUAAau 3 11 358 378 [dm3:3L:15558583-15558603:+] 0.4998 122 0 -2.03 -0.1008 MIMAT0000343 dme-miR-280 39685 CG7427 auaGUAA-AGUAUACGUUGC-AUUUAUGu |:|| |: ||| || :| ||||||| uuaCGUUCUUCUAU-CAUUGAUAAAUACa 2 25 354 381 [dm3:3L:15558579-15558606:+] 0.4998 160 7 -13.61 -1.2394 MIMAT0000343 dme-miR-280 39685 CG7427 auAGUAAAGUAUAC-G--UUGCAUUUA-UGu ||:|| | |||| | :|| ||||| || uuUCGUUGCUUAUGACUAGACAUAAAUCACa 2 26 283 313 [dm3:3L:15558508-15558538:+] 0.4600 135 0 -13.26 -0.6988 MIMAT0000343 dme-miR-280 39685 CG7427 auaguaaAGUAUACGUUGCAUUUAUgu ||||| || |||||| aaaagcgUCAUAAUAAA--UAAAUAaa 3 21 111 135 [dm3:3L:15558336-15558360:+] 0.5901 133 0 -6.96 -0.2474 MIMAT0000364 dme-miR-289 39685 CG7427 ucagcguccgagGUGAAUUUAUAAAu :|| | ||||||| guauuauuuuagUACCU-AAUAUUUu 2 15 322 346 [dm3:3L:15558547-15558571:+] 0.4788 144 7 -7.48 -0.7790 MIMAT0000388 dme-miR-303 39685 CG7427 ugGUCA-AAGGACACUUUGGAUUu ::|| || :| | : |||||| ucUGGUAUUAUUUUAGUACCUAAu 2 22 318 341 [dm3:3L:15558543-15558566:+] 0.4788 124 6 -11.63 -0.1049 MIMAT0005488 dme-miR-972 39685 CG7427 cgGAUUUAUAA----GCAUAACAUGu | || |:|| :||||||||: --CGAAUUGUUACACUGUAUUGUAUu 2 21 1 24 [dm3:3L:15558226-15558249:+] 0.7494 139 0 -11.44 -0.1808 MIMAT0005502 dme-miR-985 39685 CG7427 acgggcUGGUAACCUUGUAAAc |: | | ||||||| uggaauAUAAGCGUAACAUUUu 2 17 227 248 [dm3:3L:15558452-15558473:+] 0.4581 144 7 -6.48 -0.8399 MIMAT0005502 dme-miR-985 39685 CG7427 acgggcugguaaccuUGUAAAc |||||| acggccgguaaauuuACAUUUu 2 8 83 104 [dm3:3L:15558308-15558329:+] 0.6267 120 6 -14.35 -0.1134 MIMAT0005026 dme-miR-1013 39685 CG7427 gcuCAAGCCGUAUGAAAAUa | | | : |:|||||| aauGAUAGAUUUGCUUUUAu 2 18 31 50 [dm3:3L:15558256-15558275:+] 0.6554 133 6 -7.26 -0.1646 MIMAT0011787 dme-miR-2280* 39685 CG7427 agucaaucgaaccuUCAUUUAa ||||||| aaauaaauaaaguuAGUAAAUg 2 9 125 146 [dm3:3L:15558350-15558371:+] 0.5821 140 7 -6.56 -1.1041 MIMAT0011791 dme-miR-2283 39685 CG7427 uaACAGCAU-AAGUACUAUAAAAg | |: || | | | ||||||| auUAUUUUAGUACCUAAUAUUUUg 2 22 324 347 [dm3:3L:15558549-15558572:+] 0.4788 152 7 -2.16 -0.8446 MIMAT0000113 dme-miR-8 39685 CG7427 cugUAGAAAUGGACUGUCAUAAu ||: |||| || ||||| cgaAUUGUUAC---ACUGUAUUg 2 21 1 20 [dm3:3L:15558226-15558245:+] 0.7494 124 0 -7.28 -0.1147 MIMAT0012531 dme-miR-10-3p 39685 CG7427 uuuggagAGAUCUUGGCUUAAAc |||| || :|||||| uuagaaaUCUA-AA-UGAAUUUu 2 17 260 280 [dm3:3L:15558485-15558505:+] 0.4581 136 6 -7.98 -0.1106 MIMAT0000319 dme-miR-263a 39685 CG7427 cacuuaAGAAGGUCACGGUAAUUg | || :| | :|||||| acacugUAUUGUAUUCUCAUUAAu 2 19 10 33 [dm3:3L:15558235-15558258:+] 0.6554 138 6 -6.48 -0.3154 MIMAT0000333 dme-miR-275 39685 CG7427 gcgCGCGAUGAAGUCCAUGGAcu |: :||:||:| |||||| cugGUAUUAUUUUA-GUACCUaa 3 21 319 340 [dm3:3L:15558544-15558565:+] 0.4788 142 0 -15.87 -0.2928 MIMAT0000338 dme-miR-277 39685 CG7427 acagcAUGGUCUAUCACGUAAAu |: :|||| ||| ||| auuaaUGAUAGAU-UUGCUUUUa 2 19 28 49 [dm3:3L:15558253-15558274:+] 0.6554 120 0 -8.78 -0.1009 MIMAT0000393 dme-miR-306 39685 CG7427 aaCUCUCAGUGAUUCAUGGAcu |: | | :| ||||||| cuGGUAUUAUUUUAGUACCUaa 3 21 319 340 [dm3:3L:15558544-15558565:+] 0.4788 132 0 -11.94 -0.3206 MIMAT0000406 dme-miR-314 39685 CG7427 ggcuugaauaaccGAGCUUAu ||||||| uuuugaaauaaaaCUCGAAUg 2 9 400 420 [dm3:3L:15558625-15558645:+] 0.4357 140 7 -13.05 -1.0591 MIMAT0005478 dme-miR-964 39685 CG7427 uucAAUUCGAGGGGAUAAGAUu ||| || :||||||| cuuUUAUUCU-GAUUAUUCUAa 2 20 44 64 [dm3:3L:15558269-15558289:+] 0.6554 145 7 -11.83 -1.2470 MIMAT0005478 dme-miR-964 39685 CG7427 uuCAAUUCG--AGGGGAUAAGAuu |||| | | :: |||||| uuGUUACACUGUAUUGUAUUCUca 3 21 5 28 [dm3:3L:15558230-15558253:+] 0.7494 127 0 -7.09 -0.6257 MIMAT0005479 dme-miR-932 39685 CG7427 gacguuacgugaugcCUUAACu |||||| --------------cGAAUUGu 2 8 1 8 [dm3:3L:15558226-15558233:+] 0.7494 120 6 -5.31 -0.1134 MIMAT0005501 dme-miR-927 39685 CG7427 ccauuucgcauccuUAAGAUUu ||||||| cuuuuauucugauuAUUCUAAa 2 9 44 65 [dm3:3L:15558269-15558290:+] 0.6554 140 7 -6.16 -1.2834 MIMAT0005501 dme-miR-927 39685 CG7427 ccauuucgcauccuUAAGAUUu |||||:| auagauuugcuuuuAUUCUGAu 2 9 35 56 [dm3:3L:15558260-15558281:+] 0.6554 124 0 -5.26 -0.1111 MIMAT0005019 dme-miR-1006 39685 CG7427 gauACUU-AUUCUUUA-----GCUUAAAu | || | |||||| :|||||| gcuUAAAUUUAGAAAUCUAAAUGAAUUUu 2 21 252 280 [dm3:3L:15558477-15558505:+] 0.4581 134 6 -10.30 -0.1244 MIMAT0005027 dme-miR-1014 39685 CG7427 gacgUUUACUUUUACUUAAAa |||| |||||||||| uuagAAAUCUAAAUGAAUUUu 2 18 260 280 [dm3:3L:15558485-15558505:+] 0.4581 169 7 -11.19 -1.1508

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG7427 RAID00203879 dme-miR-314-3p miRNA MIMAT0000406 CG7427 mRNA 39685 Prediction 0.2202 CG7427 RAID00417450 dme-miR-985-3p miRNA MIMAT0005502 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID00442535 dme-miR-263a-5p miRNA MIMAT0000319 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID00534503 dme-miR-8-3p miRNA MIMAT0000113 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID00633573 dme-miR-932-5p miRNA MIMAT0005479 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID02628564 dme-miR-1014-3p miRNA MIMAT0005027 CG7427 mRNA 39685 Prediction 0.2202 CG7427 RAID02643455 dme-miR-306-5p miRNA MIMAT0000393 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID02718651 dme-miR-927-5p miRNA MIMAT0005501 CG7427 mRNA 39685 Prediction 0.2202 CG7427 RAID02762994 dme-miR-1006-3p miRNA MIMAT0005019 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID03039312 dme-miR-964-5p miRNA MIMAT0005478 CG7427 mRNA 39685 Prediction 0.2202 CG7427 RAID03524916 dme-miR-277-3p miRNA MIMAT0000338 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID03589629 dme-miR-275-3p miRNA MIMAT0000333 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID03852514 dme-miR-970-3p miRNA MIMAT0005486 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID03895339 dme-miR-10-3p miRNA MIMAT0012531 CG7427 mRNA 39685 Prediction 0.1828 CG7427 RAID03950585 dme-miR-305-5p miRNA MIMAT0000391 CG7427 mRNA 39685 Prediction 0.1828