DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000330 dme-miR-184* 39881 TSG101 gccccgcucucuuaCUAUUCc |||||| caucaaaaauauucGAUAAGu 2 8 81 101 [dm3:3L:16837574-16837594:+] 0.4605 120 6 -4.32 -0.1833 MIMAT0012196 dme-miR-2489 39881 TSG101 ugACGUUUAUGUUGUA-UGUUAu || || ||:| || ||||| auUGAAAUUAUA--AUAACAAUa 2 21 127 147 [dm3:3L:16837620-16837640:+] 0.5155 121 0 -12.21 -1.2839 MIMAT0012199 dme-miR-2492 39881 TSG101 aaacuUUCGAGAGCUGUUUUGUa || | || |:|||||| acaauAAUC-CUAAAUAAAACAa 2 19 142 163 [dm3:3L:16837635-16837656:+] 0.5571 136 6 -7.67 -0.2138 MIMAT0000390 dme-miR-304 39881 TSG101 gagugUA-AAUGUUUAACUCUAAu || ||| ||||||| ||| auugaAUCUUAAAAAUUGAAAUUa 2 19 113 136 [dm3:3L:16837606-16837629:+] 0.5155 141 0 -8.46 -0.1718 MIMAT0000407 dme-miR-315 39881 TSG101 cgAAAGACUCGUUGUUAGUUUu ||| | |: || |||||| gaUUUAUAUGUUACCAUCAAAa 2 21 67 88 [dm3:3L:16837560-16837581:+] 0.4605 132 6 -7.14 -0.1432 MIMAT0005471 dme-miR-958 39881 TSG101 uuucaucuuaucuuCUUAGAGu ||||||: uuuaagcgcaaauuGAAUCUUa 2 9 102 123 [dm3:3L:16837595-16837616:+] 0.5155 124 0 -8.16 -0.3645 MIMAT0005492 dme-miR-976 39881 TSG101 cgUAACUACUAUUG--AUUAGGuu ||| || ||||| |||||| aaAUU-AUAAUAACAAUAAUCCua 3 21 131 153 [dm3:3L:16837624-16837646:+] 0.5155 145 0 -7.90 -0.4255 MIMAT0005503 dme-miR-986 39881 TSG101 agucaGU-GUUGCGAUAAGCUcu || ||| ||||||| guuacCAUCAAAAAUAUUCGAua 3 18 76 98 [dm3:3L:16837569-16837591:+] 0.4605 132 0 -10.16 -0.1993 MIMAT0005519 dme-miR-999 39881 TSG101 ucUGUGUC---AGAAUGU-CAAUUGu ||| || || |::| |||||| aaACAAAGGCCUCAUGUAUGUUAACg 2 21 158 183 [dm3:3L:16837651-16837676:+] 0.5986 123 6 -12.25 -0.7477 MIMAT0005520 dme-miR-1000 39881 TSG101 ugacgacacuguccUGUUAUa |||||| uugaaauuauaauaACAAUAa 2 8 128 148 [dm3:3L:16837621-16837641:+] 0.5155 120 6 -5.67 -0.4335 MIMAT0005027 dme-miR-1014 39881 TSG101 gacguuuACUUUU-ACUUAAAa | |||| |||| || ugaaucuUAAAAAUUGAAAUUa 2 15 115 136 [dm3:3L:16837608-16837629:+] 0.5155 121 0 -1.94 -0.1027

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score TSG101 RAID00532158 dme-miR-1000-5p miRNA MIMAT0005520 TSG101 mRNA 39881 Prediction 0.2202 TSG101 RAID00573689 dme-miR-304-5p miRNA MIMAT0000390 TSG101 mRNA 39881 Prediction 0.1828 TSG101 RAID00889967 dme-miR-315-5p miRNA MIMAT0000407 TSG101 mRNA 39881 Prediction 0.2202 TSG101 RAID01087631 dme-miR-986-5p miRNA MIMAT0005503 TSG101 mRNA 39881 Prediction 0.1828 TSG101 RAID01925760 dme-miR-976-3p miRNA MIMAT0005492 TSG101 mRNA 39881 Prediction 0.1828 TSG101 RAID02215866 dme-miR-958-3p miRNA MIMAT0005471 TSG101 mRNA 39881 Prediction 0.1828 TSG101 RAID02307169 dme-miR-999-3p miRNA MIMAT0005519 TSG101 mRNA 39881 Prediction 0.1828 TSG101 RAID03596119 dme-miR-1014-3p miRNA MIMAT0005027 TSG101 mRNA 39881 Prediction 0.1828