DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000388 dme-miR-303 40249 RhoBTB uggucaaaggacacuuUGGAUUu |||||| auauauuuguaccuuuACCUAAg 2 8 481 503 [dm3:3L:20375349-20375371:+] 0.5937 120 6 -11.10 -0.1052 MIMAT0005465 dme-miR-954 40249 RhoBTB uguguguugcguuGUGGGUCu ||||||| -------------CACCCAGc 2 9 1 8 [dm3:3L:20374799-20374806:+] 0.6703 140 7 -12.02 -0.4401 MIMAT0005488 dme-miR-972 40249 RhoBTB cggAUUUAUAAGCAUAACAUGu |||: | | | |||||| cgaUAAGGACGCAUUUUGUACa 2 20 579 600 [dm3:3L:20375447-20375468:+] 0.5937 127 6 -10.23 -0.1005 MIMAT0005488 dme-miR-972 40249 RhoBTB cgGAUU-UAUAAGCAUA-ACAUGu ||:| |:||: ||| ||||| ucCUGAUCUGUUU-UAUCUGUACg 2 21 53 75 [dm3:3L:20374921-20374943:+] 0.7055 121 0 -15.25 -1.2769 MIMAT0005488 dme-miR-972 40249 RhoBTB cggauuuauaagcauAACAUGu |||||| uguauauccauauauUUGUACc 2 8 472 493 [dm3:3L:20375340-20375361:+] 0.5937 120 6 -8.78 -0.1624 MIMAT0005500 dme-miR-984 40249 RhoBTB uuuaAGGUUGGCAU--AAAUGGAgu | :| ::||| ||||||| uccaUAUAUUUGUACCUUUACCUaa 3 20 478 502 [dm3:3L:20375346-20375370:+] 0.5937 134 0 -13.99 -0.1050 MIMAT0005502 dme-miR-985 40249 RhoBTB acGGGCUG-GUAACCUUGUAAAc :|| || :| | ||||||| auUCCUACUUACGGAAACAUUUg 2 21 528 550 [dm3:3L:20375396-20375418:+] 0.5937 151 7 -16.63 -0.6844 MIMAT0005022 dme-miR-1009 40249 RhoBTB gacUUUACAUUGUUAAAAACUcu :| | ||| | |||||| uacGAUUUUAAGUA-UUUUGAua 3 21 72 93 [dm3:3L:20374940-20374961:+] 0.7055 130 0 -4.93 -0.2543 MIMAT0005026 dme-miR-1013 40249 RhoBTB gcUCAAGCCGUAUGAAAAua | ||:| |||||||| guAUUUUG--AUACUUUUcc 3 19 83 100 [dm3:3L:20374951-20374968:+] 0.7055 135 0 -6.11 -0.2574 MIMAT0011784 dme-miR-2279* 40249 RhoBTB uuaAAGUGU-GUGUCUAUAAAUu |||: | : | ||||||| ugcUUCGGAUUUCUUAUAUUUAu 2 20 289 311 [dm3:3L:20375157-20375179:+] 0.5937 146 7 -7.22 -0.9728 MIMAT0011791 dme-miR-2283 40249 RhoBTB uaacaGCAUAAGUAC-UAUAAAAg :|||| :||| ||||||| agacaUGUAUGUAUGUAUAUUUUu 2 19 502 525 [dm3:3L:20375370-20375393:+] 0.5937 165 7 -13.21 -1.0255 MIMAT0011791 dme-miR-2283 40249 RhoBTB uaACA-GCAUAAGUACUAUAAAAg ||| || |||: :|||||| ucUGUACG-AUUUUAAGUAUUUUg 2 22 68 90 [dm3:3L:20374936-20374958:+] 0.7055 138 6 -7.07 -0.2556 MIMAT0012197 dme-miR-2490 40249 RhoBTB aacguuggacgaaauaGCGAAGu |||||| gcaaggaagaucacugCGCUUCa 2 8 15 37 [dm3:3L:20374813-20374821,20374892-20374905:+] 0.6879 120 6 -13.78 -0.1091 MIMAT0000113 dme-miR-8 40249 RhoBTB cuGUAGAAAUG--GACUGUCAUAAu :|||| ||| :| |||||| uuUAUCUGUACGAUUUUAAGUAUUu 2 22 64 88 [dm3:3L:20374932-20374956:+] 0.7055 128 6 -11.19 -0.1770 MIMAT0000114 dme-miR-9a 40249 RhoBTB agUAUGUCGAUCUA--UUG-GUUUCu ||||: ||| || ||| ||||| uuAUACGCCUAUAUAAAACGCAAAGc 2 22 308 333 [dm3:3L:20375176-20375201:+] 0.5937 136 0 -14.20 -1.1061 MIMAT0000342 dme-miR-33 40249 RhoBTB guUACGCUGAUGU-UACGUGGa :| :| |:|| ||||||| gaGUAUGUAUGCACAUGCACCu 2 20 340 361 [dm3:3L:20375208-20375229:+] 0.5937 150 7 -17.86 -0.1175 MIMAT0000392 dme-miR-9c 40249 RhoBTB agAUGUCG--AUCUUAUG-GUUUCu |||: | || || || ||||| uaUACGCCUAUAUAAAACGCAAAGc 2 21 309 333 [dm3:3L:20375177-20375201:+] 0.5937 123 0 -9.75 -1.1061 MIMAT0000395 dme-miR-9b 40249 RhoBTB guAUGUCGAU-UUUAGUG-GUUUCu |||: ||| | | || ||||| uaUACGCCUAUAUAAAACGCAAAGc 2 22 309 333 [dm3:3L:20375177-20375201:+] 0.5937 124 0 -13.59 -1.1015 MIMAT0000412 dme-miR-iab-4-5p 40249 RhoBTB aguCCUAUGUAA-GU-CAUAUGCa |||| : || :| |||||| uucGGAUUUCUUAUAUUUAUACGc 2 20 292 315 [dm3:3L:20375160-20375183:+] 0.5937 121 6 -10.60 -0.1144 MIMAT0005466 dme-miR-955 40249 RhoBTB cuGUGAGUUUG--GAGACGUGCUAc ||||||| : :|||||||||| uaCACUCAACUUGUUCUGCACGAUc 2 22 408 432 [dm3:3L:20375276-20375300:+] 0.5937 176 7 -28.86 -0.3824 MIMAT0005466 dme-miR-955 40249 RhoBTB cugugaGUUUGGAG---ACGUGCUAc |||||||| ||||||| acauaaCAAACCUCAAGGGCACGAUu 2 18 109 134 [dm3:3L:20374977-20375002:+] 0.7055 160 7 -24.53 -0.7140 MIMAT0005472 dme-miR-375 40249 RhoBTB auugaaUUCGGU-UUGCUUGUUu |||| | |||||||| auaaaaAAGCAAUUACGAACAA- 2 17 611 632 [dm3:3L:20375479-20375500:+] 0.5180 155 7 -14.30 -1.2876 MIMAT0005480 dme-miR-965 40249 RhoBTB uuccccuUUUCGAUAUGCGAAu | | :||||||| | auuucuuAUAUUUAUACGCCUa 2 16 297 318 [dm3:3L:20375165-20375186:+] 0.5937 123 0 -9.33 -0.1303 MIMAT0005483 dme-miR-1002 40249 RhoBTB agcgGGAAACAUAGGUGAUGAAUu ::|||| ||:| ||||||| uauaUUUUUGAAUUC-CUACUUAc 2 21 517 539 [dm3:3L:20375385-20375407:+] 0.5937 166 7 -15.65 -0.6752 MIMAT0005484 dme-miR-968 40249 RhoBTB guUGGGAAAUUACCUAUGAUGAAu |:::|| ||| | |||||| auAUUUUUGAAU---UCCUACUUa 2 23 518 538 [dm3:3L:20375386-20375406:+] 0.5937 126 6 -10.32 -0.1335 MIMAT0005492 dme-miR-976 40249 RhoBTB cgUAACUACUAUUGAUU-AGGUu ||| | ||| | ||| |||| ugAUUAACGAUUAAUAAGUCCAa 2 21 229 251 [dm3:3L:20375097-20375119:+] 0.5937 132 0 -10.68 -0.9079 MIMAT0005492 dme-miR-976 40249 RhoBTB cguaacuacuauugaUUAGGUu |||||| uuugauacuuuuccaAAUCCAu 2 8 87 108 [dm3:3L:20374955-20374976:+] 0.7055 120 6 -11.74 -0.1155 MIMAT0005505 dme-miR-988 40249 RhoBTB cgcacuccaaacgUUGUUCCCc |||||||| uagcucgacccagAACAAGGGa 2 10 254 275 [dm3:3L:20375122-20375143:+] 0.5937 145 7 -11.95 -0.5616 MIMAT0005507 dme-miR-137 40249 RhoBTB gaugcacauaaGAG-UUCGUUAu ||| ||||||| ucuagccauagCUCUAAGCAAUu 2 12 551 573 [dm3:3L:20375419-20375441:+] 0.5937 146 7 -12.59 -0.7405 MIMAT0005507 dme-miR-137 40249 RhoBTB gaugcacauaagagUUCGUUAu ||||||| augauagaauaaaaAAGCAAUu 2 9 603 624 [dm3:3L:20375471-20375492:+] 0.5937 140 7 -6.58 -0.9985 MIMAT0005027 dme-miR-1014 40249 RhoBTB gacguuuacuuuuACUUAAaa |||||| guauguauauuuuUGAAUUcc 3 9 512 532 [dm3:3L:20375380-20375400:+] 0.5937 120 0 -4.79 -0.1100

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score RhoBTB RAID00007613 dme-miR-33-5p miRNA MIMAT0000342 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID00046134 dme-miR-992-3p miRNA MIMAT0005510 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID00064293 dme-miR-124-3p miRNA MIMAT0000351 RhoBTB mRNA 40249 Prediction 0.2381 RhoBTB RAID00147218 dme-miR-1014-3p miRNA MIMAT0005027 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID00335209 dme-miR-9a-5p miRNA MIMAT0000114 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID00751988 dme-miR-954-5p miRNA MIMAT0005465 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID00986727 dme-miR-955-5p miRNA MIMAT0005466 RhoBTB mRNA 40249 Prediction 0.2202 RhoBTB RAID01066934 dme-miR-137-3p miRNA MIMAT0005507 RhoBTB mRNA 40249 Prediction 0.2202 RhoBTB RAID01887264 dme-miR-972-3p miRNA MIMAT0005488 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID01990895 dme-miR-985-3p miRNA MIMAT0005502 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID01997326 dme-miR-9c-5p miRNA MIMAT0000392 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02058177 dme-miR-968-5p miRNA MIMAT0005484 RhoBTB mRNA 40249 Prediction 0.2202 RhoBTB RAID02068776 dme-miR-8-3p miRNA MIMAT0000113 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02077165 dme-miR-981-3p miRNA MIMAT0005497 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02141098 dme-bantam-3p miRNA MIMAT0000365 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02197359 dme-miR-1-3p miRNA MIMAT0000105 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02496895 dme-miR-375-3p miRNA MIMAT0005472 RhoBTB mRNA 40249 Prediction 0.2202 RhoBTB RAID02520493 dme-miR-976-3p miRNA MIMAT0005492 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02795312 dme-miR-iab-4-5p miRNA MIMAT0000412 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02796461 dme-miR-958-3p miRNA MIMAT0005471 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID02816214 dme-miR-988-3p miRNA MIMAT0005505 RhoBTB mRNA 40249 Prediction 0.2202 RhoBTB RAID03128780 dme-miR-1002-5p miRNA MIMAT0005483 RhoBTB mRNA 40249 Prediction 0.2202 RhoBTB RAID03354914 dme-miR-965-3p miRNA MIMAT0005480 RhoBTB mRNA 40249 Prediction 0.1828 RhoBTB RAID03554709 dme-miR-9b-5p miRNA MIMAT0000395 RhoBTB mRNA 40249 Prediction 0.1828