DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 40582 CG12001 auaguaaagUAUACGUUGCAUUUAUGu | || :|| ||||||: uaaaagaaaAAAUAUAA-AUAAAUAUu 2 19 134 159 [dm3:3R:483668-483693:+] 0.3833 132 0 -4.79 -0.1434 MIMAT0000364 dme-miR-289 40582 CG12001 ucagcguccGAGGUGAAUUUAUAAAu :| :|:| |||||||| uuauuauuaUUAUAUUGAAAUAUUUa 2 18 86 111 [dm3:3R:483620-483645:+] 0.3910 157 7 -8.43 -1.2319 MIMAT0011784 dme-miR-2279* 40582 CG12001 uuAAAGUGUGUGUCUAUAAAUu | |:|:|: | ||||||| auUAUUAUAUUGAAAUAUUUAu 2 21 91 112 [dm3:3R:483625-483646:+] 0.3910 156 7 -5.94 -1.1097 MIMAT0000114 dme-miR-9a 40582 CG12001 aguaugucGAUCUAUUGGUUUCu | :|| |||||||| --------CGGGAAAACCAAAGg 2 16 1 15 [dm3:3R:483535-483549:+] 0.5496 155 7 -13.96 -0.5038 MIMAT0012531 dme-miR-10-3p 40582 CG12001 uuuggagagaucuuggCUUAAAc |||||| --cgggaaaaccaaagGAAUUUa 2 8 1 21 [dm3:3R:483535-483555:+] 0.5496 120 6 -5.95 -0.2011 MIMAT0000347 dme-miR-283 40582 CG12001 ucuuaauggucgacUAUAAAu |||||| auuauuauauugaaAUAUUUa 2 8 91 111 [dm3:3R:483625-483645:+] 0.3910 120 6 -7.22 -0.2179 MIMAT0000352 dme-miR-79 40582 CG12001 uacgAAACCAUUAG-AUCGAAau | || | |: |||||| uuuaUAUGCCAUUUAUAGCUUcu 3 19 108 130 [dm3:3R:483642-483664:+] 0.3833 125 0 -6.77 -0.1758 MIMAT0000392 dme-miR-9c 40582 CG12001 agaugucGAUCUUAUGGUUUCu | :||| ||||||| -------CGGGAAAACCAAAGg 2 16 1 15 [dm3:3R:483535-483549:+] 0.5496 155 7 -13.96 -0.5038 MIMAT0000395 dme-miR-9b 40582 CG12001 guaugucgaUUUUAGUGGUUUCu :||| ||||||| ------cggGAAA--ACCAAAGg 2 15 1 15 [dm3:3R:483535-483549:+] 0.5496 143 7 -11.25 -0.4705 MIMAT0000408 dme-miR-316 40582 CG12001 gcggucauucgccuUUUUCUgu |||||| uauagcuucuaauuAAAAGAaa 3 9 121 142 [dm3:3R:483655-483676:+] 0.3833 120 0 -7.74 -0.2626 MIMAT0005479 dme-miR-932 40582 CG12001 gaCGUUACGUGAUGCCUUAAcu | || | | | |||||| cgGGAAAAC-CAAAGGAAUUua 3 21 1 21 [dm3:3R:483535-483555:+] 0.5496 126 0 -6.40 -0.1455 MIMAT0005501 dme-miR-927 40582 CG12001 ccauuucgcauccuuAAGAUUu |||||| uaugccauuuauagcUUCUAAu 2 8 112 133 [dm3:3R:483646-483667:+] 0.3833 120 6 -4.09 -0.1149 MIMAT0005019 dme-miR-1006 40582 CG12001 gauaCUUAUUCUUUAGCUUAAAu |:| || || |||||| --cgGGAAAACCAAAGGAAUUUa 2 20 1 21 [dm3:3R:483535-483555:+] 0.5496 127 6 -6.48 -0.1992 MIMAT0005027 dme-miR-1014 40582 CG12001 gaCGUUUACUUUUACUUAAAa | ||| ||| |||||| cgGGAAAACCAAAGGAAUUUa 2 20 1 21 [dm3:3R:483535-483555:+] 0.5496 131 6 -4.59 -0.1974

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score spartin RAID00047858 dme-miR-79-3p miRNA MIMAT0000352 spartin mRNA 40582 Prediction 0.1828 spartin RAID00077313 dme-miR-10-3p miRNA MIMAT0012531 spartin mRNA 40582 Prediction 0.1828 spartin RAID00636268 dme-miR-1006-3p miRNA MIMAT0005019 spartin mRNA 40582 Prediction 0.2202 spartin RAID01296020 dme-miR-9b-5p miRNA MIMAT0000395 spartin mRNA 40582 Prediction 0.2202 spartin RAID01372760 dme-miR-1014-3p miRNA MIMAT0005027 spartin mRNA 40582 Prediction 0.2202 spartin RAID01562904 dme-miR-9c-5p miRNA MIMAT0000392 spartin mRNA 40582 Prediction 0.2202 spartin RAID02887811 dme-miR-283-5p miRNA MIMAT0000347 spartin mRNA 40582 Prediction 0.1828 spartin RAID03050902 dme-miR-316-5p miRNA MIMAT0000408 spartin mRNA 40582 Prediction 0.1828 spartin RAID03454030 dme-miR-9a-5p miRNA MIMAT0000114 spartin mRNA 40582 Prediction 0.2202 spartin RAID03597388 dme-miR-958-3p miRNA MIMAT0005471 spartin mRNA 40582 Prediction 0.1828 spartin RAID03779034 dme-miR-927-5p miRNA MIMAT0005501 spartin mRNA 40582 Prediction 0.1828 spartin RAID03802685 dme-miR-932-5p miRNA MIMAT0005479 spartin mRNA 40582 Prediction 0.1828