DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 41230 CG3925 ucagcGUCCGAGGUGAAUUUAUAAAu :| |:| | ||||||||||| aauaaUAAGUUACUCUUAAAUAUUUg 2 22 176 201 [dm3:3R:5877219-5877244:+] 0.5066 173 7 -13.38 -1.0852 MIMAT0000364 dme-miR-289 41230 CG3925 ucagcguCCGAGG--UGAAUUUA-UAAAu ||:| | |:|| ||| |||| auauuauGGUUACAAAUUUCAAUCAUUUa 2 20 208 236 [dm3:3R:5877251-5877279:+] 0.5094 122 0 -7.40 -1.1015 MIMAT0000388 dme-miR-303 41230 CG3925 uggucaaaggACACUUUGGAUUu ||| |||||||| auggcguggaUGU-AAACCUAAu 2 14 135 156 [dm3:3R:5877178-5877199:+] 0.4868 151 7 -12.25 -0.7604 MIMAT0005026 dme-miR-1013 41230 CG3925 gcuCAAGCCGU--AUGAAAAUa |||: || |||||||| uucGUUUCACAACUACUUUUAg 2 18 94 115 [dm3:3R:5877137-5877158:+] 0.5012 152 7 -8.56 -0.6008 MIMAT0005026 dme-miR-1013 41230 CG3925 gcucaagccguAUGAAAAUa |:|||||| ucuuaaauauuUGCUUUUAa 2 10 189 208 [dm3:3R:5877232-5877251:+] 0.5066 129 6 -5.01 -0.4632 MIMAT0011784 dme-miR-2279* 41230 CG3925 uuaaagugugUGUCUAUAAAUu |: |||||||| uguaaaccuaAUUGAUAUUUAc 2 13 145 166 [dm3:3R:5877188-5877209:+] 0.5037 148 7 -6.24 -0.5295 MIMAT0011784 dme-miR-2279* 41230 CG3925 uuaaAGUGUGUGUCUAUAAAUu |:|| | :| ||||||: uaagUUACUCUUAAAUAUUUGc 2 19 181 202 [dm3:3R:5877224-5877245:+] 0.5066 142 0 -5.89 -0.1809 MIMAT0011791 dme-miR-2283 41230 CG3925 uaacagcAUAAGUA-CUAUAAAag || || | |||||| aauaaguUACUCUUAAAUAUUUgc 3 17 179 202 [dm3:3R:5877222-5877245:+] 0.5066 127 0 -3.19 -0.1792 MIMAT0012201 dme-miR-2493 41230 CG3925 ugcGGAGCGUGUUUAUGUGUGCc |:|: :|||| ||||||| cuaCUUUUAGCAAAAACACACGg 2 21 106 128 [dm3:3R:5877149-5877171:+] 0.5012 164 7 -23.13 -0.7238 MIMAT0012204 dme-miR-2495 41230 CG3925 ucAGUCGGGUUAA-CUUCACGGu ||| :|| || ||||||| uuUCA-AUCAUUUAAAAGUGCCg 2 21 224 245 [dm3:3R:5877267-5877288:+] 0.5094 149 7 -15.86 -0.6668 MIMAT0000347 dme-miR-283 41230 CG3925 ucuuaauGGUCGACUAUAAAu |:| :|||||||| uguaaacCUAAUUGAUAUUUa 2 15 145 165 [dm3:3R:5877188-5877208:+] 0.5037 154 7 -13.42 -1.1899 MIMAT0000347 dme-miR-283 41230 CG3925 ucUUAAUGGUCGACUAUAAAu |:||||: : |||||| uaAGUUACUCUUAAAUAUUUg 2 20 181 201 [dm3:3R:5877224-5877244:+] 0.5066 127 6 -8.25 -0.1581 MIMAT0005484 dme-miR-968 41230 CG3925 guUGGG-AAAUUACCUA------UGAUGAAu |||: |||||| :| ||||||| ggACCUGUUUAAUUCGUUUCACAACUACUUu 2 23 82 112 [dm3:3R:5877125-5877155:+] 0.5326 148 7 -13.13 -0.9764 MIMAT0005027 dme-miR-1014 41230 CG3925 gaCGUUUACUUUUACU-UAAAa |:||| || ||| |||| auGUAAACCUAAUUGAUAUUUa 2 20 144 165 [dm3:3R:5877187-5877208:+] 0.4868 123 0 -4.76 -1.0435

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG3925 RAID00835898 dme-miR-968-5p miRNA MIMAT0005484 CG3925 mRNA 41230 Prediction 0.2202 CG3925 RAID01675147 dme-miR-263b-5p miRNA MIMAT0000362 CG3925 mRNA 41230 Prediction 0.1828 CG3925 RAID01752132 dme-miR-303-5p miRNA MIMAT0000388 CG3925 mRNA 41230 Prediction 0.1828 CG3925 RAID01979390 dme-miR-283-5p miRNA MIMAT0000347 CG3925 mRNA 41230 Prediction 0.2202 CG3925 RAID02087810 dme-mir-307a miRNA MI0000418 CG3925 mRNA 41230 Prediction 0.1828 CG3925 RAID02710227 dme-miR-1013-3p miRNA MIMAT0005026 CG3925 mRNA 41230 Prediction 0.1828 CG3925 RAID02975066 dme-miR-1014-3p miRNA MIMAT0005027 CG3925 mRNA 41230 Prediction 0.1828