DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 42302 CG5555 auaguaaaGUAUACGUUGCAUUUAUGu | || | :|: ||||||: aacgaaaaCCUAAG-GAU-UAAAUAUa 2 20 119 143 [dm3:3R:15003837-15003861:-] 0.5563 127 0 -7.72 -0.1463 MIMAT0000388 dme-miR-303 42302 CG5555 uggucaaaggacacUUUGGAUUu |||||||| ccuuuguauaacgaAAACCUAAg 2 10 110 132 [dm3:3R:15003848-15003870:-] 0.5563 145 7 -12.58 -0.9307 MIMAT0005521 dme-miR-1001 42302 CG5555 acuaggaacccuCAAAUGGGu |||||||| ccaagcugcauuGUUUACCCg 2 10 30 50 [dm3:3R:15003930-15003950:-] 0.4582 145 7 -15.86 -0.4362 MIMAT0012214 dme-miR-2500* 42302 CG5555 ccauaACAUAUACACACAAGGAAug | |||||||| |||||| acagcUCUAUAUGUGAUUUCCUUug 3 21 91 115 [dm3:3R:15003865-15003889:-] 0.5563 156 0 -15.27 -0.1655 MIMAT0005463 dme-miR-iab-4as-5p 42302 CG5555 gccAUAUGGAAGUCAU-AUGCAUu |||| || | || |||||| aaaUAUAACU--ACUACUACGUAg 2 21 137 158 [dm3:3R:15003822-15003843:-] 0.5256 125 6 -9.66 -1.1186 MIMAT0005513 dme-miR-994 42302 CG5555 uagugccgAUGAUAAAGGAAuc |:: |||||||| gcucuauaUGUGAUUUCCUUug 3 15 94 115 [dm3:3R:15003865-15003886:-] 0.5563 134 0 -10.64 -0.1752

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG5555 RAID01508628 dme-miR-1001-5p miRNA MIMAT0005521 CG5555 mRNA 42302 Prediction 0.1828 CG5555 RAID02461647 dme-miR-219-5p miRNA MIMAT0000335 CG5555 mRNA 42302 Prediction 0.1828 CG5555 RAID02618410 dme-miR-994-5p miRNA MIMAT0005513 CG5555 mRNA 42302 Prediction 0.1828 CG5555 RAID02846057 dme-miR-iab-8-5p miRNA MIMAT0005463 CG5555 mRNA 42302 Prediction 0.1828 CG5555 RAID03073709 dme-miR-303-5p miRNA MIMAT0000388 CG5555 mRNA 42302 Prediction 0.1828 CG5555 RAID03238326 dme-miR-308-3p miRNA MIMAT0000399 CG5555 mRNA 42302 Prediction 0.1828