DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 42840 CG13604 auAGUAA-AGUAUACGUUGCAUUU-AUGu |::|| | || || |: |||| ||| uuUUGUUCGCUUA-GCUAUUUAAAGUACg 2 26 106 133 [dm3:3R:19815061-19815088:-] 0.5506 122 0 -8.16 -1.1472 MIMAT0005488 dme-miR-972 42840 CG13604 cggauuuaUAAGCAUAACAUGu | |:| ||||||| ccgcauuaAGUUG-AUUGUACu 2 15 161 181 [dm3:3R:19815013-19815033:-] 0.5460 144 7 -10.73 -0.4139 MIMAT0005488 dme-miR-972 42840 CG13604 cgGAUUU-AUAAGCAUA-ACAUGu :|||| || |: ||| ||||| uuUUAAAGUAAUU-UAUAUGUACa 2 21 192 214 [dm3:3R:19814980-19815002:-] 0.5415 125 0 -9.28 -1.1637 MIMAT0005499 dme-miR-983 42840 CG13604 aguaAUCAAGCUU-UGCAUAAUa || || |: |||||||: uagcUAUUUAAAGUACGUAUUGa 2 19 117 139 [dm3:3R:19815055-19815077:-] 0.5506 137 0 -8.62 -0.1994 MIMAT0005502 dme-miR-985 42840 CG13604 acgggcugguaaccuUGUAAAc |||||| auauauugaauauauACAUUUa 2 8 349 370 [dm3:3R:19814824-19814845:-] 0.5415 120 6 -6.51 -0.2003 MIMAT0005025 dme-miR-1012 42840 CG13604 gauaccccuuUUAGA-AACUGAUu :|||| ||||||| caaucaaugcGAUCUAUUGACUAu 2 14 325 348 [dm3:3R:19814846-19814869:-] 0.5415 152 7 -10.93 -1.1234 MIMAT0005029 dme-miR-1016 42840 CG13604 gauUCAUACCU--CUCUCCACUu :| | ||| :||||||| auuGGGACGGACCUGGAGGUGAa 2 19 54 76 [dm3:3R:19815118-19815140:-] 0.6626 145 7 -19.26 -0.6075 MIMAT0011787 dme-miR-2280* 42840 CG13604 agucaaucgaaccuuCAUUUAa |||||| cugaagaaacuauacGUAAAUu 2 8 84 105 [dm3:3R:19815089-19815110:-] 0.6066 120 6 -4.11 -0.1626 MIMAT0012196 dme-miR-2489 42840 CG13604 ugACGUUUAUGUUGUAUG-UUAu ||| |:|| | :|||| ||| uaUGCCAGUA-AUUAUACUAAUu 2 21 376 397 [dm3:3R:19814797-19814818:-] 0.5415 126 0 -9.48 -0.4664 MIMAT0012199 dme-miR-2492 42840 CG13604 aaacuuucgagagcUGUUUUGua ||||||| cuagauuuagaaguACAAAACca 3 10 585 607 [dm3:3R:19814587-19814609:-] 0.5415 125 0 -6.44 -0.1150 MIMAT0012211 dme-miR-2498 42840 CG13604 uucAUUCUGCCCUUACGGUCAaa | | || | |||||||| cauUUAUAC-CGUAUGCCAGUaa 3 21 365 386 [dm3:3R:19814808-19814829:-] 0.5415 134 0 -13.30 -0.1974 MIMAT0012212 dme-miR-2499* 42840 CG13604 cguaacgcgacugcagaUGCGUGc |||||| uacaaaaccauguaacaACGCACa 2 8 598 621 [dm3:3R:19814573-19814596:-] 0.5415 120 6 -11.88 -0.1306 MIMAT0012214 dme-miR-2500* 42840 CG13604 ccAUA-ACAUAU-ACACACAAG-GAAUg ||| ||| | | | ||||| |||| acUAUACGUAAAUUUUUUGUUCGCUUAg 2 24 92 119 [dm3:3R:19815075-19815102:-] 0.6066 129 0 -7.78 -1.1345 MIMAT0000113 dme-miR-8 42840 CG13604 cuguagaaauggacUGUCAUAau ||||||| uaauggaacaauaaACAGUAUac 3 10 625 647 [dm3:3R:19814547-19814569:-] 0.5415 125 0 -6.77 -0.1082 MIMAT0000355 dme-miR-210 42840 CG13604 aucggcgACAGUG-UGCGUGUu ||| || ||||||| aaaaccaUGUAACAACGCACAa 2 15 601 622 [dm3:3R:19814572-19814593:-] 0.5415 153 7 -19.40 -1.1393 MIMAT0000391 dme-miR-305 42840 CG13604 gucucgUGGACUA---CUUCAUGUUa ||: ||| ||||||||| uuaucgACUAGAUUUAGAAGUACAAa 2 18 578 603 [dm3:3R:19814591-19814616:-] 0.5415 156 7 -14.19 -1.1702 MIMAT0000412 dme-miR-iab-4-5p 42840 CG13604 aguccuauguaagucAUAUGCa |||||| acacgcugaagaaacUAUACGu 2 8 79 100 [dm3:3R:19815094-19815115:-] 0.6066 120 6 -8.11 -0.1634 MIMAT0005463 dme-miR-iab-4as-5p 42840 CG13604 gccauauggaagUCAUAUGCAUu | |||||||| cacgcugaagaaACUAUACGUAa 2 12 80 102 [dm3:3R:19815092-19815114:-] 0.6066 147 7 -13.24 -1.2221 MIMAT0005463 dme-miR-iab-4as-5p 42840 CG13604 gccAUAUGGAAGUCAUAUGCAUu || : ||:| :|||||| gcuUAGCUAUUUAAAGUACGUAu 2 21 114 136 [dm3:3R:19815058-19815080:-] 0.5506 136 6 -9.34 -0.1119 MIMAT0005463 dme-miR-iab-4as-5p 42840 CG13604 gcCAUAUGGAAGU-CAUAU-GCAUu | |||: | || |||| |||| uuGAAUAUAUACAUUUAUACCGUAu 2 22 354 378 [dm3:3R:19814816-19814840:-] 0.5415 124 0 -7.97 -0.8035 MIMAT0005468 dme-miR-193 42840 CG13604 caacccugaauCAUCCGGUCAu ||| |||||| acauuuauaccGUAUGCCAGUa 2 12 364 385 [dm3:3R:19814809-19814830:-] 0.5415 123 6 -13.27 -0.1951 MIMAT0005472 dme-miR-375 42840 CG13604 auugaauucgguuugCUUGUUu |||||| acgcacaacauaaugGAACAAu 2 8 615 636 [dm3:3R:19814558-19814579:-] 0.5415 120 6 -6.43 -0.1241 MIMAT0005485 dme-miR-969 42840 CG13604 uuuugaacGAAUCACCUUGag | || |||||| acgcacaaCAUAAUGGAACaa 3 14 615 635 [dm3:3R:19814559-19814579:-] 0.5415 129 0 -6.93 -0.1800 MIMAT0005496 dme-miR-980 42840 CG13604 auUCGGGAAGU--GU--UCCGUC-GAu |||| ||:| || |||||| || guAGCCAUUUAUCCAAGAGGCAGACUu 2 21 496 522 [dm3:3R:19814672-19814698:-] 0.5415 126 0 -18.61 -0.7370 MIMAT0005497 dme-miR-981 42840 CG13604 acguccaaagcagcUGUUGCuu |||||| uacaaaaccauguaACAACGca 3 9 598 619 [dm3:3R:19814575-19814596:-] 0.5415 120 0 -10.48 -0.1126 MIMAT0005023 dme-miR-1010 42840 CG13604 gacgUUUACCUUGCUAUCCACUUu ::| ||| | : ||||||| auugGGACGGACCUGGAGGUGAAu 2 21 54 77 [dm3:3R:19815117-19815140:-] 0.6626 156 7 -20.98 -0.2857

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG13604 RAID00005217 dme-miR-1016-3p miRNA MIMAT0005029 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID00247762 dme-miR-193-3p miRNA MIMAT0005468 CG13604 mRNA 42840 Prediction 0.2202 CG13604 RAID00253942 dme-miR-263a-5p miRNA MIMAT0000319 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID00333681 dme-miR-970-3p miRNA MIMAT0005486 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID00621753 dme-miR-283-5p miRNA MIMAT0000347 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID01230057 dme-miR-972-3p miRNA MIMAT0005488 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID01311774 dme-miR-34-5p miRNA MIMAT0000350 CG13604 mRNA 42840 Prediction 0.2381 CG13604 RAID01418874 dme-miR-1010-3p miRNA MIMAT0005023 CG13604 mRNA 42840 Prediction 0.2202 CG13604 RAID01924111 dme-miR-1000-5p miRNA MIMAT0005520 CG13604 mRNA 42840 Prediction 0.2202 CG13604 RAID01995735 dme-miR-980-3p miRNA MIMAT0005496 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID02291812 dme-miR-1012-3p miRNA MIMAT0005025 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID02416526 dme-miR-981-3p miRNA MIMAT0005497 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID02512760 dme-miR-969-5p miRNA MIMAT0005485 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID02548938 dme-miR-8-3p miRNA MIMAT0000113 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID02618553 dme-miR-14-3p miRNA MIMAT0000120 CG13604 mRNA 42840 Prediction 0.2381 CG13604 RAID02971833 dme-miR-iab-8-5p miRNA MIMAT0005463 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID03214085 dme-miR-210-3p miRNA MIMAT0000355 CG13604 mRNA 42840 Prediction 0.2381 CG13604 RAID03278228 dme-miR-375-3p miRNA MIMAT0005472 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID03724139 dme-miR-305-5p miRNA MIMAT0000391 CG13604 mRNA 42840 Prediction 0.2202 CG13604 RAID03799215 dme-miR-987-5p miRNA MIMAT0005504 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID03837262 dme-mir-iab-8 miRNA MI0005805 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID03944374 dme-miR-985-3p miRNA MIMAT0005502 CG13604 mRNA 42840 Prediction 0.1828 CG13604 RAID04021433 dme-miR-iab-4-5p miRNA MIMAT0000412 CG13604 mRNA 42840 Prediction 0.1828