DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005489 dme-miR-973 42935 CG5794 uuuUAGCUUCAAGUUGGUGG-UUGGu ||| || |||:|||| |||| cauAUCCAAUACCAAUCACCUAACCa 2 23 27 52 [dm3:3R:20466090-20466115:-] 0.5208 138 0 -19.71 -1.1372 MIMAT0011788 dme-miR-2281* 42935 CG5794 aacguagacgucgacgUCUAUUa |||||| aaaaaacaaaaaaucaAGAUAAa 2 8 87 109 [dm3:3R:20466033-20466055:-] 0.4971 120 6 -9.31 -0.1810 MIMAT0012199 dme-miR-2492 42935 CG5794 aaacUUUCGAGAGCUGUUUUGUa ||| :|: | | |||||| ugacAAAAUUUCCAAAAAAACAa 2 20 73 95 [dm3:3R:20466047-20466069:-] 0.5208 131 6 -7.56 -0.3966 MIMAT0012215 dme-miR-2500 42935 CG5794 gacuccaggUGUGUGUUUUAGg | ||| |||||| uuuccaaaaAAACAAAAAAUCa 2 14 81 102 [dm3:3R:20466040-20466061:-] 0.5208 125 6 -11.28 -0.5132 MIMAT0000407 dme-miR-315 42935 CG5794 cgaaagacucguuGUUAGUUUu |||||||| ------------uCAAUCAAAc 2 10 1 10 [dm3:3R:20466132-20466141:-] 0.5208 145 7 -7.83 -0.8579 MIMAT0000407 dme-miR-315 42935 CG5794 cgaaagacucgUUGUUAGUUUu || ||||||: ccaaaaaaacaAAAAAUCAAGa 2 12 84 105 [dm3:3R:20466037-20466058:-] 0.5208 131 0 -8.16 -0.7926 MIMAT0005467 dme-miR-190 42935 CG5794 guugguucuuauaguuuGUAUAGa |||||| caaccauucaagcaugcCAUAUCc 2 8 10 33 [dm3:3R:20466109-20466132:-] 0.5208 120 6 -14.90 -0.2841

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score puf RAID00047964 dme-miR-277-3p miRNA MIMAT0000338 puf mRNA 42935 Prediction 0.1828 puf RAID00207625 dme-miR-985-3p miRNA MIMAT0005502 puf mRNA 42935 Prediction 0.1828 puf RAID00412314 dme-mir-307a miRNA MI0000418 puf mRNA 42935 Prediction 0.1828 puf RAID00443847 dme-miR-1-3p miRNA MIMAT0000105 puf mRNA 42935 Prediction 0.1828 puf RAID00521949 dme-miR-961-5p miRNA MIMAT0005475 puf mRNA 42935 Prediction 0.1828 puf RAID00751262 dme-miR-998-3p miRNA MIMAT0005518 puf mRNA 42935 Prediction 0.1828 puf RAID01499037 dme-miR-285-3p miRNA MIMAT0000356 puf mRNA 42935 Prediction 0.1828 puf RAID01575771 dme-miR-137-3p miRNA MIMAT0005507 puf mRNA 42935 Prediction 0.1828 puf RAID01638623 dme-miR-263b-5p miRNA MIMAT0000362 puf mRNA 42935 Prediction 0.1828 puf RAID02486493 dme-miR-995-3p miRNA MIMAT0005514 puf mRNA 42935 Prediction 0.1828 puf RAID02856063 dme-miR-87-3p miRNA MIMAT0000361 puf mRNA 42935 Prediction 0.1828 puf RAID03497896 dme-miR-190-5p miRNA MIMAT0005467 puf mRNA 42935 Prediction 0.1828 puf RAID03553175 dme-miR-283-5p miRNA MIMAT0000347 puf mRNA 42935 Prediction 0.1828 puf RAID03870767 dme-miR-14-3p miRNA MIMAT0000120 puf mRNA 42935 Prediction 0.1828 puf RAID04009935 dme-miR-315-5p miRNA MIMAT0000407 puf mRNA 42935 Prediction 0.2202