DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 43475 CG2010 auaguaAAGUAUACGUUGCAUUUAUgu | |||| |:||: |||||| uaaacgUACAUAGGUAAUUUAAAUAaa 3 22 196 222 [dm3:3R:25324616-25324642:+] 0.5680 153 0 -11.81 -0.5134 MIMAT0000388 dme-miR-303 43475 CG2010 uggucaAAGGACACUUUGGAUUu || || | |||:|||| guuuaaUUACU-UUAAAUCUAAa 2 18 174 195 [dm3:3R:25324594-25324615:+] 0.5776 139 0 -9.83 -0.1624 MIMAT0005491 dme-miR-975 43475 CG2010 uauguccuacAUCCUUCACAAAu || | ||||||| ucgcuuacaaUAAG-AGUGUUUu 2 14 124 145 [dm3:3R:25324544-25324565:+] 0.5776 143 7 -7.57 -1.0431 MIMAT0005509 dme-miR-991 43475 CG2010 ugaAAGGUUUGAUGUUGAAAUu ||:|: : |: |||||| uucUUUCGUUUAAUUACUUUAa 2 20 167 188 [dm3:3R:25324587-25324608:+] 0.5776 123 6 -11.13 -0.4400 MIMAT0005521 dme-miR-1001 43475 CG2010 acuaggaACCCUCAAAUGGGu ||||| ||||||| cucuggaUGGGA-UUUACCCa 2 15 66 85 [dm3:3R:25324486-25324505:+] 0.3142 156 7 -20.60 -0.1345 MIMAT0011784 dme-miR-2279* 43475 CG2010 uuaaaGUGUGUGUCUA-UAAAUu |::|||:||:| ||||| auaaaCGUACAUAGGUAAUUUAa 2 18 195 217 [dm3:3R:25324615-25324637:+] 0.5680 121 0 -18.23 -0.3093 MIMAT0012197 dme-miR-2490 43475 CG2010 aacguuGGACG-AAAUAGCGAAGu :|||: ||| |||||| auguuuUCUGUAUUUUCCGCUUCu 2 18 147 170 [dm3:3R:25324567-25324590:+] 0.5776 128 6 -19.47 -0.2973 MIMAT0012199 dme-miR-2492 43475 CG2010 aaacuuucgagagcugUUUUGUa |||||| auagguaauuuaaauaAAAACAa 2 8 205 227 [dm3:3R:25324625-25324647:+] 0.5584 120 6 -4.59 -0.4199 MIMAT0012214 dme-miR-2500* 43475 CG2010 ccAUAACAUAUACACACAAG-GAAUg |:|| | |:||||| ||| |||| aaUGUU-UCUGUGUGUUUUCGCUUAc 2 24 107 131 [dm3:3R:25324527-25324551:+] 0.4729 141 0 -18.51 -0.9699 MIMAT0000407 dme-miR-315 43475 CG2010 cgaaAGACUCGUUGUUAGUUUu |:| | :|| || |||| guaaUUUAAAUAA-AAACAAAa 2 19 209 229 [dm3:3R:25324629-25324649:+] 0.5584 120 0 -3.71 -0.3810 MIMAT0005476 dme-miR-962 43475 CG2010 cugucGUAGUUAAAGAGAUGGAAUa | |: :||| :|||:||| cgcuuCUUUCGUUUAAUUACUUUAa 2 21 164 188 [dm3:3R:25324584-25324608:+] 0.5776 140 0 -8.32 -0.1227 MIMAT0005504 dme-miR-987 43475 CG2010 guaguuAGGUCUGAUAAAUGAAAu |:: | :|| ||||||| cgcuucUUUCGUUUAAUUACUUUa 2 19 164 187 [dm3:3R:25324584-25324607:+] 0.5776 154 7 -11.26 -1.3172 MIMAT0005507 dme-miR-137 43475 CG2010 gaugcacauaagagUUCGUUAu ||||||| cagggccggaggagAAGCAAUg 2 9 89 110 [dm3:3R:25324509-25324530:+] 0.3682 140 7 -8.39 -0.1430

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG2010 RAID00442578 dme-miR-966-5p miRNA MIMAT0005481 CG2010 mRNA 43475 Prediction 0.1828 CG2010 RAID01422601 dme-miR-962-5p miRNA MIMAT0005476 CG2010 mRNA 43475 Prediction 0.1828 CG2010 RAID01652955 dme-miR-991-3p miRNA MIMAT0005509 CG2010 mRNA 43475 Prediction 0.1828 CG2010 RAID02488765 dme-miR-137-3p miRNA MIMAT0005507 CG2010 mRNA 43475 Prediction 0.2202 CG2010 RAID02569747 dme-miR-1000-5p miRNA MIMAT0005520 CG2010 mRNA 43475 Prediction 0.1828 CG2010 RAID02854781 dme-miR-1001-5p miRNA MIMAT0005521 CG2010 mRNA 43475 Prediction 0.1828 CG2010 RAID02892211 dme-miR-315-5p miRNA MIMAT0000407 CG2010 mRNA 43475 Prediction 0.1828 CG2010 RAID03101007 dme-miR-975-5p miRNA MIMAT0005491 CG2010 mRNA 43475 Prediction 0.1828 CG2010 RAID03412523 dme-miR-987-5p miRNA MIMAT0005504 CG2010 mRNA 43475 Prediction 0.2202