DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 53428 wds auaguAAAGUAUACGUUGC--AUUUA-UGu | | | || | ||| ||||| || ggaacUCUAAAAUUCUACGUUUAAAUCACa 2 23 163 192 [dm3:X:2481825-2481854:+] 0.5088 121 0 -6.52 -1.1504 MIMAT0005481 dme-miR-966 53428 wds gguGUGUCGGGUGUUGG-GUGu |||| :::| |||| ||| aauCACACUUUA-AACCUCACa 2 19 186 206 [dm3:X:2481848-2481868:+] 0.5088 120 0 -18.22 -1.2029 MIMAT0011784 dme-miR-2279* 53428 wds uuAAAGUGUGUGUCUA-UAAAUu |||: :::||: || ||||| uuUUUUUUGUACGCAUAAUUUAa 2 21 131 153 [dm3:X:2481793-2481815:+] 0.4480 128 0 -11.04 -1.0760 MIMAT0012199 dme-miR-2492 53428 wds aaacuuucgagagcugUUUUGUa |||||| uacaaacaaacaaacaAAAACAa 2 8 229 251 [dm3:X:2481891-2481913:+] 0.5088 120 6 -3.51 -0.2579 MIMAT0012199 dme-miR-2492 53428 wds aaacuuucgagagcugUUUUGUa |||||| acaaaaacaaaaaaaaAAAACAa 2 8 242 264 [dm3:X:2481904-2481926:+] 0.5088 120 6 -2.74 -0.8151 MIMAT0012212 dme-miR-2499* 53428 wds cguaacgcgacugcAGAUGCGUGc | ||||||: cccccuuuuuuuuuUGUACGCAUa 2 11 124 147 [dm3:X:2481786-2481809:+] 0.4480 126 0 -9.49 -0.1331 MIMAT0012215 dme-miR-2500 53428 wds gacuccaggUGUGUGUUUUAGg ||| |||||| | uacaaacaaACAAACAAAAACa 2 14 229 250 [dm3:X:2481891-2481912:+] 0.5088 125 0 -6.56 -0.3168 MIMAT0000408 dme-miR-316 53428 wds gcgGUCAUUCGCCUUUUUCUgu || ||| : ||||||| acgCA-UAAUUUAAAAAAGAaa 3 20 141 161 [dm3:X:2481803-2481823:+] 0.4480 133 0 -9.07 -0.1021 MIMAT0005478 dme-miR-964 53428 wds uucaaUUCGAGGGGAUAAGAUu :| |||: |||||| aaaagGAACUCUAAAAUUCUAc 2 18 159 180 [dm3:X:2481821-2481842:+] 0.4784 121 6 -9.35 -0.1127 MIMAT0005485 dme-miR-969 53428 wds uuuugaacgaaucaCCUUGAg |||||| uuuaaaaaagaaaaGGAACUc 2 8 149 169 [dm3:X:2481811-2481831:+] 0.4784 120 6 -11.53 -0.2380

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score wds RAID01162691 dme-miR-969-5p miRNA MIMAT0005485 wds mRNA 53428 Prediction 0.1828 wds RAID01201914 dme-miR-991-3p miRNA MIMAT0005509 wds mRNA 53428 Prediction 0.1828 wds RAID01472411 dme-miR-971-3p miRNA MIMAT0005487 wds mRNA 53428 Prediction 0.1828 wds RAID02056651 dme-miR-964-5p miRNA MIMAT0005478 wds mRNA 53428 Prediction 0.1828 wds RAID02301763 dme-miR-316-5p miRNA MIMAT0000408 wds mRNA 53428 Prediction 0.1828