DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 35085 Socs36E auAGUAAAGUAU-ACGUUG--CAUUUAUGu | || | || ||: || |||||||| aaUGAUGUGUUACUGUUACGUGUAAAUACg 2 26 425 454 [dm3:2L:18139079-18139108:-] 0.5039 159 7 -14.32 -0.2645 MIMAT0000343 dme-miR-280 35085 Socs36E auaGUAAAGUAUACGU-UGCAUUUAUGu |:| | | | ||| :|||||||| acaCGUGU-AGA-GCAUUUGUAAAUACu 2 25 611 636 [dm3:2L:18138897-18138922:-] 0.4795 151 7 -16.15 -0.2571 MIMAT0000343 dme-miR-280 35085 Socs36E auAGUAAAGUAU-ACGUUG--CAUUUAUGu | || | || ||: || |||||||| aaUGAUGUGUUACUGUUACGUGUAAAUACg 2 26 737 766 [dm3:2L:18139079-18139108:-] 0.5039 159 7 -14.32 -0.2236 MIMAT0000343 dme-miR-280 35085 Socs36E auaGUAAAGUAUACGU-UGCAUUUAUGu |:| | | | ||| :|||||||| acaCGUGU-AGA-GCAUUUGUAAAUACu 2 25 923 948 [dm3:2L:18138897-18138922:-] 0.4795 151 7 -16.15 -0.2171 MIMAT0000364 dme-miR-289 35085 Socs36E ucAGCGUCCGAGGUGAAU-UUAUAAAu |||| || | : |||: ||||||| aaUCGCUGG-UAUUCUUGUAAUAUUUc 2 25 371 396 [dm3:2L:18139137-18139162:-] 0.5260 165 7 -16.12 -0.8266 MIMAT0000364 dme-miR-289 35085 Socs36E ucAGCGUCCGAGGUGAAU-UUAUAAAu |||| || | : |||: ||||||| aaUCGCUGG-UAUUCUUGUAAUAUUUc 2 25 683 708 [dm3:2L:18139137-18139162:-] 0.5260 165 7 -16.12 -0.7563 MIMAT0005475 dme-miR-961 35085 Socs36E uagaGUCAAUGACCACUAGUUu || || | ||||||| caaaCAAAUAAAGUUGAUCAAg 2 19 830 851 [dm3:2L:18138682-18138703:-] 0.4668 150 7 -9.89 -1.0719 MIMAT0005475 dme-miR-961 35085 Socs36E uagaGUCAAUGACCACUAGUUu || || | ||||||| caaaCAAAUAAAGUUGAUCAAg 2 19 1142 1163 [dm3:2L:18138682-18138703:-] 0.4668 150 7 -9.89 -1.0217 MIMAT0005482 dme-miR-967 35085 Socs36E gcgaagaggucuccAUAGAGa |||||| uaauguauuuuacaUAUCUCa 2 8 757 777 [dm3:2L:18138756-18138776:-] 0.5789 120 6 -7.97 -0.1027 MIMAT0005488 dme-miR-972 35085 Socs36E cggauUUAUAAGCAUAACAUGu |:| | ||||||| aucgcAGUUAGCUAAUUGUACu 2 18 265 286 [dm3:2L:18139247-18139268:-] 0.5236 141 7 -8.73 -1.1252 MIMAT0005488 dme-miR-972 35085 Socs36E cggauUUAUAAGCAUAACAUGu |:| | ||||||| aucgcAGUUAGCUAAUUGUACu 2 18 577 598 [dm3:2L:18139247-18139268:-] 0.5236 141 7 -8.73 -1.0763 MIMAT0005502 dme-miR-985 35085 Socs36E acggGCUGGUAACC--UUGUAAac | :::||| | |||||| guugCUGUUAUUCGUAAACAUUca 3 19 707 730 [dm3:2L:18138803-18138826:-] 0.5789 129 0 -8.86 -0.1305 MIMAT0005502 dme-miR-985 35085 Socs36E acggGCUGGUAACC--UUGUAAac | :::||| | |||||| guugCUGUUAUUCGUAAACAUUca 3 19 1019 1042 [dm3:2L:18138803-18138826:-] 0.5789 129 0 -8.86 -0.1083 MIMAT0005509 dme-miR-991 35085 Socs36E ugAAAGGUUUGAUGUUGAAAUu ||| ::|| || |||||| uaUUUAUGAA-UA-UACUUUAu 2 21 523 542 [dm3:2L:18138991-18139010:-] 0.4795 124 6 -4.61 -0.1207 MIMAT0005509 dme-miR-991 35085 Socs36E ugAAAGGUUUGAUGUUGAAAUu ||| ::|| || |||||| uaUUUAUGAA-UA-UACUUUAu 2 21 835 854 [dm3:2L:18138991-18139010:-] 0.4795 124 6 -4.61 -0.1000 MIMAT0005517 dme-miR-997 35085 Socs36E acuuugaGGAAGCUCAA-ACCc ::||:||||| ||| ggacggaUUUUUGAGUUGUGGc 2 15 207 228 [dm3:2L:18139305-18139326:-] 0.5236 122 0 -16.29 -0.3599 MIMAT0005517 dme-miR-997 35085 Socs36E acuuugaGGAAGCUCAA-ACCc ::||:||||| ||| ggacggaUUUUUGAGUUGUGGc 2 15 519 540 [dm3:2L:18139305-18139326:-] 0.5236 122 0 -16.29 -0.3026 MIMAT0005022 dme-miR-1009 35085 Socs36E gacUUUACAUUG-UUAAAAACUCu |: | :|| :||||||||| ugcAGCUCGGACGGAUUUUUGAGu 2 21 199 222 [dm3:2L:18139311-18139334:-] 0.5236 155 7 -12.06 -0.2409 MIMAT0005022 dme-miR-1009 35085 Socs36E gacUUUACAUUG-UUAAAAACUCu |: | :|| :||||||||| ugcAGCUCGGACGGAUUUUUGAGu 2 21 511 534 [dm3:2L:18139311-18139334:-] 0.5236 155 7 -12.06 -0.1988 MIMAT0011784 dme-miR-2279* 35085 Socs36E uuAAAGUGUGUGUCUAUAAAUu |||| || |:| |||||| ugUUUC-CA-AUACCUAUUUAa 2 21 740 759 [dm3:2L:18138774-18138793:-] 0.5789 128 6 -9.37 -0.1600 MIMAT0011784 dme-miR-2279* 35085 Socs36E uuAAAGUGUGUGUCUAUAAAUu |||| || |:| |||||| ugUUUC-CA-AUACCUAUUUAa 2 21 1052 1071 [dm3:2L:18138774-18138793:-] 0.5789 128 6 -9.37 -0.1333 MIMAT0011789 dme-miR-2281 35085 Socs36E cguuAUG-ACGUCUAUG-UCUAu ||| ||:| |||| |||| cuguUACGUGUAAAUACGAGAUa 2 18 437 459 [dm3:2L:18139074-18139096:-] 0.5039 128 0 -12.45 -0.5681 MIMAT0011789 dme-miR-2281 35085 Socs36E cguuAUG-ACGUCUAUG-UCUAu ||| ||:| |||| |||| cuguUACGUGUAAAUACGAGAUa 2 18 749 771 [dm3:2L:18139074-18139096:-] 0.5039 128 0 -12.45 -0.5015 MIMAT0011791 dme-miR-2283 35085 Socs36E uaacAGCAUAAGUAC--UAUAAAag | |||||| || |||||| ucgcUGGUAUUCUUGUAAUAUUUca 3 20 373 397 [dm3:2L:18139136-18139160:-] 0.5260 146 0 -10.05 -0.1207 MIMAT0011791 dme-miR-2283 35085 Socs36E uaacaGCAUAAGUACUAUAAAAg | ||||:| :|||||| caauaCCUAUUUAAUGUAUUUUa 2 19 746 768 [dm3:2L:18138765-18138787:-] 0.5789 146 6 -6.39 -0.1838 MIMAT0011791 dme-miR-2283 35085 Socs36E uaacaGCAUAAGUACUAUAAAAg | ||||:| :|||||| caauaCCUAUUUAAUGUAUUUUa 2 19 1058 1080 [dm3:2L:18138765-18138787:-] 0.5789 146 6 -6.39 -0.1536 MIMAT0012199 dme-miR-2492 35085 Socs36E aaacuuucgagagcugUUUUGUa |||||| ugcguaucaauauucaAAAACAa 2 8 792 814 [dm3:2L:18138719-18138741:-] 0.5099 120 6 -4.58 -0.1448 MIMAT0012199 dme-miR-2492 35085 Socs36E aaacuuucgagagcugUUUUGUa |||||| ugcguaucaauauucaAAAACAa 2 8 1104 1126 [dm3:2L:18138719-18138741:-] 0.5099 120 6 -4.58 -0.1204 MIMAT0012215 dme-miR-2500 35085 Socs36E gaCUCCAGGUGUG-UGUUUUAGg || | |||||: |||||||| gcGAAG-CCACAUAACAAAAUCg 2 21 106 127 [dm3:2L:18139406-18139427:-] 0.5236 165 7 -18.86 -0.4626 MIMAT0012215 dme-miR-2500 35085 Socs36E gacuccAGGUGUGUGUUUUAGg |:|| | |||||||| ucaauaUUCAAAAACAAAAUCg 2 17 798 819 [dm3:2L:18138714-18138735:-] 0.5099 160 7 -11.70 -1.0674 MIMAT0012215 dme-miR-2500 35085 Socs36E gaCUCCAGGUGUG-UGUUUUAGg || | |||||: |||||||| gcGAAG-CCACAUAACAAAAUCg 2 21 418 439 [dm3:2L:18139406-18139427:-] 0.5236 165 7 -18.86 -0.3953 MIMAT0012215 dme-miR-2500 35085 Socs36E gacuccAGGUGUGUGUUUUAGg |:|| | |||||||| ucaauaUUCAAAAACAAAAUCg 2 17 1110 1131 [dm3:2L:18138714-18138735:-] 0.5099 160 7 -11.70 -1.0168 MIMAT0000105 dme-miR-1 35085 Socs36E gaGGUAUGAAG-AAAUGUAAGgu |::| ||| | |||||| ugCUGUUAUUCGUAAACAUUCaa 3 21 709 731 [dm3:2L:18138802-18138824:-] 0.5789 131 0 -9.39 -0.1139 MIMAT0000108 dme-miR-3 35085 Socs36E acuCUGUGUGAAACGGGUCACu || ||| | ||||||| acuGAGACAAU---CCCAGUGc 2 20 52 70 [dm3:2L:18139463-18139481:-] 0.5236 147 7 -21.78 -0.3777 MIMAT0000108 dme-miR-3 35085 Socs36E acuCUGUGUGAAACGGGUCACu || ||| | ||||||| acuGAGACAAU---CCCAGUGc 2 20 364 382 [dm3:2L:18139463-18139481:-] 0.5236 147 7 -21.78 -0.3130 MIMAT0000113 dme-miR-8 35085 Socs36E cuguagaaauggacugUCAUAAu |||||| auuguacuauaaacuaAGUAUUa 2 8 279 301 [dm3:2L:18139232-18139254:-] 0.5236 120 6 -7.56 -0.1341 MIMAT0000113 dme-miR-8 35085 Socs36E cuguagaaauggacugUCAUAAu |||||| auuguacuauaaacuaAGUAUUa 2 8 591 613 [dm3:2L:18139232-18139254:-] 0.5236 120 6 -7.56 -0.1092 MIMAT0000120 dme-miR-14 35085 Socs36E auccucucucuUUUUCUGACu | ||||||| agcucgcuacuACAAGACUGu 2 11 130 150 [dm3:2L:18139383-18139403:-] 0.5236 142 7 -9.32 -0.4094 MIMAT0000120 dme-miR-14 35085 Socs36E auccucucucuUUUUCUGACu | ||||||| agcucgcuacuACAAGACUGu 2 11 442 462 [dm3:2L:18139383-18139403:-] 0.5236 142 7 -9.32 -0.3469 MIMAT0000335 dme-miR-219 35085 Socs36E guucuuaacgcaaAC-CUGUUAGu || ||||||| ccaaaacucaaacUGAGACAAUCc 2 11 41 64 [dm3:2L:18139469-18139492:-] 0.5236 141 7 -8.62 -0.3412 MIMAT0000335 dme-miR-219 35085 Socs36E guucuuaacgcaaAC-CUGUUAGu || ||||||| ccaaaacucaaacUGAGACAAUCc 2 11 353 376 [dm3:2L:18139469-18139492:-] 0.5236 141 7 -8.62 -0.3033 MIMAT0000347 dme-miR-283 35085 Socs36E ucUUAA-UGGUCGACUAUAAau |:|| |:|| |||||| aaAGUUGAUCA--AGAUAUUag 3 20 839 858 [dm3:2L:18138675-18138694:-] 0.4668 127 0 -5.88 -0.1600 MIMAT0000347 dme-miR-283 35085 Socs36E ucUUAA-UGGUCGACUAUAAau |:|| |:|| |||||| aaAGUUGAUCA--AGAUAUUag 3 20 1151 1170 [dm3:2L:18138675-18138694:-] 0.4668 127 0 -5.88 -0.1333 MIMAT0000357 dme-miR-100 35085 Socs36E gugUUCAAGCCUAAAUGCCCAa ::| || | ||||||| gagGGGGUC-AACAUACGGGUc 2 20 76 96 [dm3:2L:18139749-18139769:-] 0.5427 141 7 -14.90 -0.1379 MIMAT0000398 dme-miR-307 35085 Socs36E gaGUGAGUUCCUCCAAC-ACu :|| | ||| ||||| || ccUAC-CUAGGUGGUUGCUGu 2 19 695 714 [dm3:2L:18138819-18138838:-] 0.5789 120 0 -15.10 -0.7884 MIMAT0000398 dme-miR-307 35085 Socs36E gaGUGAGUUCCUCCAAC-ACu :|| | ||| ||||| || ccUAC-CUAGGUGGUUGCUGu 2 19 1007 1026 [dm3:2L:18138819-18138838:-] 0.5789 120 0 -15.10 -0.7192 MIMAT0000401 dme-miR-309 35085 Socs36E auccugUUUGAAAUGGGUCACg |:|| | ||||||| aaacugAGACAAU-CCCAGUGc 2 17 50 70 [dm3:2L:18139463-18139483:-] 0.5236 146 7 -20.85 -0.3807 MIMAT0000401 dme-miR-309 35085 Socs36E auccugUUUGAAAUGGGUCACg |:|| | ||||||| aaacugAGACAAU-CCCAGUGc 2 17 362 382 [dm3:2L:18139463-18139483:-] 0.5236 146 7 -20.85 -0.3156 MIMAT0000410 dme-miR-318 35085 Socs36E acucuaUUUGUUUCGGGUCACu |:|| || ||||||| aaacugAGAC-AAUCCCAGUGc 2 17 50 70 [dm3:2L:18139463-18139483:-] 0.5236 154 7 -18.39 -0.4012 MIMAT0000410 dme-miR-318 35085 Socs36E acucuaUUUGUUUCGGGUCACu |:|| || ||||||| aaacugAGAC-AAUCCCAGUGc 2 17 362 382 [dm3:2L:18139463-18139483:-] 0.5236 154 7 -18.39 -0.3338 MIMAT0005467 dme-miR-190 35085 Socs36E guUGGUUCUUAUAGUUUGUAUAGa |:: | :|||: ||||||| cuAUUUAAUGUAUUUUACAUAUCu 2 23 752 775 [dm3:2L:18138758-18138781:-] 0.5789 154 7 -12.98 -1.0334 MIMAT0005467 dme-miR-190 35085 Socs36E guUGGUUCUUAUAGUUUGUAUAGa |:: | :|||: ||||||| cuAUUUAAUGUAUUUUACAUAUCu 2 23 1064 1087 [dm3:2L:18138758-18138781:-] 0.5789 154 7 -12.98 -0.9791 MIMAT0005490 dme-miR-974 35085 Socs36E uuaUGAUGAAG-AAACGAGCGAa || | || | ||||||| auaACAAAAUCGCUAGCUCGCUa 2 20 116 138 [dm3:2L:18139395-18139417:-] 0.5236 146 7 -12.26 -1.0167 MIMAT0005490 dme-miR-974 35085 Socs36E uuaUGAUGAAG-AAACGAGCGAa || | || | ||||||| auaACAAAAUCGCUAGCUCGCUa 2 20 428 450 [dm3:2L:18139395-18139417:-] 0.5236 146 7 -12.26 -0.9538 MIMAT0005493 dme-miR-977 35085 Socs36E aaucuGUUGCACUUAUAGAGu || | | ||||||| auguuCACCAUAUAUAUCUCa 2 17 168 188 [dm3:2L:18139345-18139365:-] 0.5236 148 7 -9.73 -1.1235 MIMAT0005493 dme-miR-977 35085 Socs36E aaUCUGUUGCACUUAUAGAGu | ::| : | ||||||| uaAUGUAUUUUACAUAUCUCa 2 20 757 777 [dm3:2L:18138756-18138776:-] 0.5789 143 7 -11.21 -1.0800 MIMAT0005493 dme-miR-977 35085 Socs36E aaucuGUUGCACUUAUAGAGu || | | ||||||| auguuCACCAUAUAUAUCUCa 2 17 480 500 [dm3:2L:18139345-18139365:-] 0.5236 148 7 -9.73 -1.0741 MIMAT0005493 dme-miR-977 35085 Socs36E aaUCUGUUGCACUUAUAGAGu | ::| : | ||||||| uaAUGUAUUUUACAUAUCUCa 2 20 1069 1089 [dm3:2L:18138756-18138776:-] 0.5789 143 7 -11.21 -1.0308 MIMAT0005512 dme-miR-993 35085 Socs36E ucuauggacaucucuGCUCGAAg ||||||| aaaagaagggccaauCGAGCUUu 2 9 344 366 [dm3:2L:18139167-18139189:-] 0.5236 140 7 -14.57 -0.7040 MIMAT0005512 dme-miR-993 35085 Socs36E ucuauggacaucucuGCUCGAAg ||||||| aaaagaagggccaauCGAGCUUu 2 9 656 678 [dm3:2L:18139167-18139189:-] 0.5236 140 7 -14.57 -0.6304 MIMAT0005027 dme-miR-1014 35085 Socs36E gacguUUACUUUUACUUAAaa ||| | |||||||| auauuAAU-AUAAUGAAUUau 3 17 663 682 [dm3:2L:18138851-18138870:-] 0.5789 138 0 -4.92 -0.1416 MIMAT0005027 dme-miR-1014 35085 Socs36E gacGUUU--ACUUUUAC-UUAAAa |||| | ||||| ||||| agcCAAAUUUCCAAAUGUAAUUUu 2 19 495 518 [dm3:2L:18139015-18139038:-] 0.4795 125 0 -7.49 -0.6286 MIMAT0005027 dme-miR-1014 35085 Socs36E gacguUUACUUUUACUUAAaa ||| | |||||||| auauuAAU-AUAAUGAAUUau 3 17 975 994 [dm3:2L:18138851-18138870:-] 0.5789 138 0 -4.92 -0.1177 MIMAT0005027 dme-miR-1014 35085 Socs36E gacGUUU--ACUUUUAC-UUAAAa |||| | ||||| ||||| agcCAAAUUUCCAAAUGUAAUUUu 2 19 807 830 [dm3:2L:18139015-18139038:-] 0.4795 125 0 -7.49 -0.5599 MIMAT0005030 dme-miR-1017 35085 Socs36E ccuacucaaacccAUCUCGAAAg | ||||||| aaagaagggccaaUCGAGCUUUu 2 11 345 367 [dm3:2L:18139166-18139188:-] 0.5236 142 7 -12.44 -0.2458 MIMAT0005030 dme-miR-1017 35085 Socs36E ccuacucaaacccAUCUCGAAAg | ||||||| aaagaagggccaaUCGAGCUUUu 2 11 657 679 [dm3:2L:18139166-18139188:-] 0.5236 142 7 -12.44 -0.2053

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Socs36E RAID00082353 dme-miR-315-5p miRNA MIMAT0000407 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID00285540 dme-miR-1009-3p miRNA MIMAT0005022 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID00338073 dme-miR-283-5p miRNA MIMAT0000347 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID00453567 dme-miR-993-3p miRNA MIMAT0005512 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID00488710 dme-bantam-3p miRNA MIMAT0000365 Socs36E mRNA 35085 Reporter Assay 0.7311 Socs36E RAID00946091 dme-miR-972-3p miRNA MIMAT0005488 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID01018789 dme-miR-1017-3p miRNA MIMAT0005030 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID01290143 dme-miR-967-5p miRNA MIMAT0005482 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID01333159 dme-miR-954-5p miRNA MIMAT0005465 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID01646699 dme-miR-974-5p miRNA MIMAT0005490 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID01679365 dme-miR-190-5p miRNA MIMAT0005467 Socs36E mRNA 35085 Prediction 0.2381 Socs36E RAID01774303 dme-miR-961-5p miRNA MIMAT0005475 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID02152125 dme-miR-309-3p miRNA MIMAT0000401 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID02177829 dme-miR-307a-3p miRNA MIMAT0000398 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID02267925 dme-miR-1-3p miRNA MIMAT0000105 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID02280007 dme-miR-8-3p miRNA MIMAT0000113 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID02333139 dme-miR-14-3p miRNA MIMAT0000120 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID02685920 dme-miR-100-5p miRNA MIMAT0000357 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID02879196 dme-miR-1014-3p miRNA MIMAT0005027 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID02927779 dme-miR-219-5p miRNA MIMAT0000335 Socs36E mRNA 35085 Prediction 0.2381 Socs36E RAID03190421 dme-miR-3-3p miRNA MIMAT0000108 Socs36E mRNA 35085 Prediction 0.2202 Socs36E RAID03338906 dme-miR-318-3p miRNA MIMAT0000410 Socs36E mRNA 35085 Prediction 0.2381 Socs36E RAID03479375 dme-miR-33-5p miRNA MIMAT0000342 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID03515989 dme-miR-987-5p miRNA MIMAT0005504 Socs36E mRNA 35085 Prediction 0.1828 Socs36E RAID04051949 dme-miR-977-3p miRNA MIMAT0005493 Socs36E mRNA 35085 Prediction 0.2202