DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000330 dme-miR-184* 50070 mask gccccGCUCU-CUUACUAUUcc ||| | |||||||| aaauaCGAAAUAAAUGAUAAua 3 17 1771 1792 [dm3:3R:20075507-20075528:+] 0.5147 135 0 -8.80 -0.1147 MIMAT0000330 dme-miR-184* 50070 mask gccccgcucUCUUACUAUUcc | |||||||| aagaaaugcAAAAUGAUAAaa 3 13 389 409 [dm3:3R:20074125-20074145:+] 0.4927 132 0 -5.13 -0.1800 MIMAT0000343 dme-miR-280 50070 mask auAGUAAAG-UAUACGU-UGCAUUUAUGu |:||| | | | :| || ||||||| uuUUAUUACAACACUUAUACAUAAAUACa 2 26 756 784 [dm3:3R:20074492-20074520:+] 0.5050 159 7 -9.13 -1.1318 MIMAT0000343 dme-miR-280 50070 mask auAGUAAAGUAUACGUUGCAUUUAUGu | |||| | | :||: ||||||: auUAAUUUAAAAAUUAAUAUAAAUAUa 2 26 2168 2194 [dm3:3R:20075904-20075930:+] 0.5738 153 0 -7.27 -0.1059 MIMAT0000343 dme-miR-280 50070 mask auaguaaaguauacguugcaUUUAUGu |||||| acgaugggaauaaaaaugaaAAAUACa 2 8 2079 2105 [dm3:3R:20075815-20075841:+] 0.5220 120 6 -9.05 -0.1094 MIMAT0000343 dme-miR-280 50070 mask auAGUAAAG-UAUACGU-UGCAUUUAUGu |:||| | | | :| || ||||||| uuUUAUUACAACACUUAUACAUAAAUACa 2 26 756 784 [dm3:3R:20074492-20074520:+] 0.5050 159 7 -9.13 -1.2677 MIMAT0000360 dme-miR-287 50070 mask cacGUUUGCUA--AAAGUUGUGu ||||| | || |||||| acaCAAACUUUUAUUACAACACu 2 19 748 770 [dm3:3R:20074484-20074506:+] 0.5050 129 6 -11.60 -0.1289 MIMAT0000360 dme-miR-287 50070 mask cacGUUUGCUA--AAAGUUGUGu ||||| | || |||||| acaCAAACUUUUAUUACAACACu 2 19 748 770 [dm3:3R:20074484-20074506:+] 0.5050 129 6 -11.60 -0.2937 MIMAT0000363 dme-miR-288 50070 mask guACU-UUACUUUAGC--UGUACUUu ||| ||| || :| :|||||| aaUGAUAAUAUAAGUGAAGCAUGAAa 2 22 1783 1808 [dm3:3R:20075519-20075544:+] 0.5774 139 6 -13.58 -0.1120 MIMAT0000364 dme-miR-289 50070 mask ucagcguccgaggugaauUUAUAAAu ||||||| gaacaugcaaagcgaaauAAUAUUUu 2 9 130 155 [dm3:3R:20073866-20073891:+] 0.4945 140 7 -7.95 -0.7764 MIMAT0000364 dme-miR-289 50070 mask ucagcguccgAGGUGAAUUUAUAAAu ||:|: || |||||| cauaaauacaUCUAUAUAUAUAUUUa 2 17 775 800 [dm3:3R:20074511-20074536:+] 0.5050 132 6 -8.44 -0.1750 MIMAT0000364 dme-miR-289 50070 mask ucagcguccgaggugaauUUAUAAAu ||||||| gaacaugcaaagcgaaauAAUAUUUu 2 9 130 155 [dm3:3R:20073866-20073891:+] 0.4945 140 7 -7.95 -1.0475 MIMAT0000364 dme-miR-289 50070 mask ucagcguccgAGGUGAAUUUAUAAAu ||:|: || |||||| cauaaauacaUCUAUAUAUAUAUUUa 2 17 775 800 [dm3:3R:20074511-20074536:+] 0.5050 132 6 -8.44 -0.3659 MIMAT0000364 dme-miR-289 50070 mask ucagcguccgaggugaAUUUAUAAAu | :|||||| uuuauuuuuaaauguaUUGAUAUUUu 2 11 478 503 [dm3:3R:20074214-20074239:+] 0.5050 126 6 -5.55 -0.1155 MIMAT0005464 dme-miR-iab-4as-3p 50070 mask auuUGCAU-AUGACUUACAUAGg |: || | :| |||||||: auuAUUUAUUUUUAAAUGUAUUg 2 20 474 496 [dm3:3R:20074210-20074232:+] 0.5050 138 0 -5.79 -0.1376 MIMAT0005475 dme-miR-961 50070 mask uaGAGUCAAUGACCACUA-GUUu :| |||||:| |||| ||| guUUAAGUUAUU--UGAUACAAc 2 21 1877 1897 [dm3:3R:20075613-20075633:+] 0.5259 125 0 -9.32 -0.8869 MIMAT0005481 dme-miR-966 50070 mask ggUGUGUCGGGUG-UUGGGUGu ||||| | ||| ||||||| caACACA-CACACAAACCCACa 2 20 628 648 [dm3:3R:20074364-20074384:+] 0.5050 164 7 -26.02 -0.5024 MIMAT0005481 dme-miR-966 50070 mask ggUGUGUCGGG--UGUUGGGUGu |:| ||:: | ||||||| auAUAAUGCUUAGAGAACCCACg 2 20 1666 1688 [dm3:3R:20075402-20075424:+] 0.5228 146 7 -18.78 -0.2126 MIMAT0005481 dme-miR-966 50070 mask ggUGUGUCGGGUG-UUGGGUGu ||||| | ||| ||||||| caACACA-CACACAAACCCACa 2 20 628 648 [dm3:3R:20074364-20074384:+] 0.5050 164 7 -26.02 -0.8200 MIMAT0005488 dme-miR-972 50070 mask cggauUUAUAAGCAU-AACAUGu | | ||:| | |||||| auaauAUUUUUUGAAUUUGUACa 2 18 146 168 [dm3:3R:20073882-20073904:+] 0.4945 121 6 -9.97 -1.1070 MIMAT0005488 dme-miR-972 50070 mask cggauUUAUAAGCAU-AACAUGu | | ||:| | |||||| auaauAUUUUUUGAAUUUGUACa 2 18 146 168 [dm3:3R:20073882-20073904:+] 0.4945 121 6 -9.97 -1.2497 MIMAT0005489 dme-miR-973 50070 mask uuUUAGCUUC-AAGUUGG--UGGUUGGu | || ||| | | ||| ||||||| aaACUCAAAGAUACUACCAAACCAACCa 2 24 1074 1101 [dm3:3R:20074810-20074837:+] 0.4371 161 7 -17.54 -0.6973 MIMAT0005502 dme-miR-985 50070 mask acgggcugguaaccUUGUAAac |||||| uauauauauuuaauAACAUUaa 3 9 789 810 [dm3:3R:20074525-20074546:+] 0.5050 120 0 -3.64 -0.1274 MIMAT0005502 dme-miR-985 50070 mask acGGGCUGGUAACCUUGUAAac :|: |: | || |||||| agUCUUAUGAAUGAAACAUUaa 3 21 691 712 [dm3:3R:20074427-20074448:+] 0.5050 136 0 -9.04 -0.1041 MIMAT0005502 dme-miR-985 50070 mask acgggcugguaaccUUGUAAac |||||| uauauauauuuaauAACAUUaa 3 9 789 810 [dm3:3R:20074525-20074546:+] 0.5050 120 0 -3.64 -0.2706 MIMAT0005509 dme-miR-991 50070 mask ugaaAGGUUUGAUGUUGAAAuu | || || | |||||| aaaaUACACAC-A-AACUUUua 3 19 741 760 [dm3:3R:20074477-20074496:+] 0.5050 126 0 -5.67 -0.1254 MIMAT0010206 dme-miR-995* 50070 mask gcgucgaggguguaUUAAGCCc ||||||| uauaaaaacguuugAAUUCGGg 2 9 302 323 [dm3:3R:20074038-20074059:+] 0.4945 140 7 -15.38 -0.3991 MIMAT0010206 dme-miR-995* 50070 mask gcgucgaggguguaUUAAGCCc ||||||| uauaaaaacguuugAAUUCGGg 2 9 302 323 [dm3:3R:20074038-20074059:+] 0.4945 140 7 -15.38 -0.6927 MIMAT0005026 dme-miR-1013 50070 mask gcucaagccGUAUGAAAAUa || ||||||| aaauacacaCAAACUUUUAu 2 12 742 761 [dm3:3R:20074478-20074497:+] 0.5050 147 7 -8.79 -0.7894 MIMAT0005026 dme-miR-1013 50070 mask gcUCAAGCCGUAUGAAAAUa || | |: ||||||| ugAGAUACACGAACUUUUAu 2 19 1432 1451 [dm3:3R:20075168-20075187:+] 0.5228 146 7 -11.48 -0.3513 MIMAT0005026 dme-miR-1013 50070 mask gcucaagccGUAUGAAAAUa || ||||||| aaauacacaCAAACUUUUAu 2 12 742 761 [dm3:3R:20074478-20074497:+] 0.5050 147 7 -8.79 -1.0693 MIMAT0011784 dme-miR-2279* 50070 mask uuaaAGUGUGUGUCUAUAAAUu || :|:|:| ||||||| uacaUC-UAUAUAUAUAUUUAa 2 19 781 801 [dm3:3R:20074517-20074537:+] 0.5050 156 7 -9.71 -1.2016 MIMAT0011784 dme-miR-2279* 50070 mask uuaaAGUGUGUGUCUAUAAAUu || :|:|:| ||||||| uacaUC-UAUAUAUAUAUUUAa 2 19 781 801 [dm3:3R:20074517-20074537:+] 0.5050 156 7 -9.71 -1.2960 MIMAT0011786 dme-miR-2280 50070 mask uauAAAAUA-ACGGUUCGAU-UCu ||||:| ||:::||||| || gcuUUUUGUGUGUUGAGCUAUAGg 2 20 529 552 [dm3:3R:20074265-20074288:+] 0.5050 134 0 -13.86 -0.2939 MIMAT0011786 dme-miR-2280 50070 mask uauAAAAUA-ACGGUUCGAU-UCu ||||:| ||:::||||| || gcuUUUUGUGUGUUGAGCUAUAGg 2 20 529 552 [dm3:3R:20074265-20074288:+] 0.5050 134 0 -13.86 -0.5609 MIMAT0011787 dme-miR-2280* 50070 mask agucaaucgaaccUUCAUUUAa |||||||| aaaacgaaacgaaAAGUAAAUc 2 10 554 575 [dm3:3R:20074290-20074311:+] 0.5050 145 7 -5.64 -0.5075 MIMAT0011787 dme-miR-2280* 50070 mask agucaaucgaaccUUCAUUUAa |||||||| aaaacgaaacgaaAAGUAAAUc 2 10 554 575 [dm3:3R:20074290-20074311:+] 0.5050 145 7 -5.64 -0.8215 MIMAT0011788 dme-miR-2281* 50070 mask aacgUAGACGUCGAC-GUCUAUUa | | |||| | ||||||| gaaaAACCACAGCCGACAGAUAAu 2 20 1006 1029 [dm3:3R:20074742-20074765:+] 0.5050 154 7 -15.29 -0.5314 MIMAT0011790 dme-miR-2282 50070 mask uaaGAUAA-AAAUCGAGU-GGCUa || || ||| | ||| |||| gaaCUUUUAUUUCGAUCACCCGAu 2 20 1442 1465 [dm3:3R:20075178-20075201:+] 0.5228 126 0 -13.32 -0.2125 MIMAT0011791 dme-miR-2283 50070 mask uaACAGCAUAAGU-ACUAUAAAAg | |: || :| ||||||||| auUUUUAAAUGUAUUGAUAUUUUu 2 22 481 504 [dm3:3R:20074217-20074240:+] 0.5050 156 7 -11.46 -0.5013 MIMAT0011791 dme-miR-2283 50070 mask uaacagcauaagUACUAUAAAAg || ||||||| augcaaagcgaaAUAAUAUUUUu 2 12 134 156 [dm3:3R:20073870-20073892:+] 0.4945 147 7 -5.25 -0.7406 MIMAT0011791 dme-miR-2283 50070 mask uaacAGCAUAAGUACUAUAAAag || ||| :|| |||||| uacaUC-UAUAUAU-AUAUUUaa 3 20 781 801 [dm3:3R:20074517-20074537:+] 0.5050 135 0 -3.53 -0.1222 MIMAT0011791 dme-miR-2283 50070 mask uaACAGCAUAAGU-ACUAUAAAAg | |: || :| ||||||||| auUUUUAAAUGUAUUGAUAUUUUu 2 22 481 504 [dm3:3R:20074217-20074240:+] 0.5050 156 7 -11.46 -0.8114 MIMAT0011791 dme-miR-2283 50070 mask uaacagcauaagUACUAUAAAAg || ||||||| augcaaagcgaaAUAAUAUUUUu 2 12 134 156 [dm3:3R:20073870-20073892:+] 0.4945 147 7 -5.25 -1.0207 MIMAT0011791 dme-miR-2283 50070 mask uaacAGCAUAAGUACUAUAAAag || ||| :|| |||||| uacaUC-UAUAUAU-AUAUUUaa 3 20 781 801 [dm3:3R:20074517-20074537:+] 0.5050 135 0 -3.53 -0.2687 MIMAT0011791 dme-miR-2283 50070 mask uaacagcAUA-AGUACUAUAAAAg ||| |:|| |||||| uccaauaUAUAUUAU-UUAUUUUu 2 17 464 486 [dm3:3R:20074200-20074222:+] 0.4979 121 6 -2.73 -0.1086 MIMAT0012194 dme-miR-307-as* 50070 mask gguagUGUUG-GAGGAACUC-ACu |:||: :| |||||| || gaacgAUAAUGUUGCUUGAGAUGa 2 18 1638 1661 [dm3:3R:20075374-20075397:+] 0.5228 120 0 -14.77 -0.7645 MIMAT0012198 dme-miR-2491 50070 mask ucGUUGACGUUUCCGUUGUCGc ||||| || |||||||| acCAACU--AACAGCAACAGCu 2 21 240 259 [dm3:3R:20073976-20073995:+] 0.4945 161 7 -15.85 -0.1727 MIMAT0012198 dme-miR-2491 50070 mask ucGUUGACGUUUCCGUUGUCGc ||||| || |||||||| acCAACU--AACAGCAACAGCu 2 21 240 259 [dm3:3R:20073976-20073995:+] 0.4945 161 7 -15.85 -0.3618 MIMAT0012199 dme-miR-2492 50070 mask aaacuuucgagagcugUUUUGUa |||||| aaauaugaaaaguaugAAAACAa 2 8 2199 2221 [dm3:3R:20075935-20075957:+] 0.5738 120 6 -6.32 -0.1456 MIMAT0012200 dme-miR-2493* 50070 mask accgacACACACACAC-ACUCg | | |||||| |||| gguagcUUUUUGUGUGUUGAGc 2 16 525 546 [dm3:3R:20074261-20074282:+] 0.5050 123 0 -20.40 -0.1949 MIMAT0012200 dme-miR-2493* 50070 mask accgacACACACACAC-ACUCg | | |||||| |||| gguagcUUUUUGUGUGUUGAGc 2 16 525 546 [dm3:3R:20074261-20074282:+] 0.5050 123 0 -20.40 -0.4056 MIMAT0012201 dme-miR-2493 50070 mask ugcggagcgugUUUAUGUGUGcc |||||||||| agcuaaaguuaAAAUACACACaa 3 13 731 753 [dm3:3R:20074467-20074489:+] 0.5050 140 0 -14.78 -0.1580 MIMAT0012202 dme-miR-2494* 50070 mask aaggguuagaccacGUGAAUg |||||| aacuuuuauuacaaCACUUAu 2 8 753 773 [dm3:3R:20074489-20074509:+] 0.5050 120 6 -10.39 -0.1422 MIMAT0012208 dme-miR-2497* 50070 mask uugUUGAUGUAAAACGUUACGAAUg :|: |:: | | :|||||||| ugaGAUGAUGAUAUAUAAUGCUUAg 2 23 1654 1678 [dm3:3R:20075390-20075414:+] 0.5228 158 7 -9.78 -0.4976 MIMAT0012208 dme-miR-2497* 50070 mask uuguUGAUGUAAAACGUU-ACGAAUg | || | ||| || |||||| aguuAGUAGAAAUUGAAAUUGCUUAa 2 22 1191 1216 [dm3:3R:20074927-20074952:+] 0.5228 129 6 -7.96 -1.0908 MIMAT0012209 dme-miR-2497 50070 mask gaCGUUUGUAACAUUUACAACa | ::| | | ||||||| uaGAGGAGAACGAUAAUGUUGc 2 21 1631 1652 [dm3:3R:20075367-20075388:+] 0.5228 144 7 -9.53 -0.3947 MIMAT0012215 dme-miR-2500 50070 mask gacuccaggUGUGUGUUUUAgg | |::|||||| acgcuaaagAAAUGCAAAAUga 3 14 383 404 [dm3:3R:20074119-20074140:+] 0.4945 129 0 -6.18 -0.1888 MIMAT0000319 dme-miR-263a 50070 mask cacuUAAGAAGGUCACGGUAAUUg || : |::| | |||||| auauAUAUAUUUAAUAACAUUAAu 2 21 788 811 [dm3:3R:20074524-20074547:+] 0.5050 124 6 -5.27 -0.1480 MIMAT0000319 dme-miR-263a 50070 mask cacuuaagaaggucacgGUAAUUg |||||| cagucuuaugaaugaaaCAUUAAa 2 8 690 713 [dm3:3R:20074426-20074449:+] 0.5050 120 6 -8.33 -0.1352 MIMAT0000332 dme-miR-274 50070 mask uaaugggcaaucacagccaGUGUUUu |||||| cagcuaaaguuaaaauacaCACAAAc 2 8 730 755 [dm3:3R:20074466-20074491:+] 0.5050 120 6 -10.05 -0.1367 MIMAT0000346 dme-miR-282 50070 mask ugUCUGUUUCG-GAUCAUCUCCGAUCUAa | || || : || | ||||||| ggAAACCAACUAACAGCAACAGCUAGAUg 2 27 236 264 [dm3:3R:20073972-20074000:+] 0.4945 145 7 -12.94 -0.1892 MIMAT0000346 dme-miR-282 50070 mask ugUCUGUUUCG-GAUCAUCUCCGAUCUAa | || || : || | ||||||| ggAAACCAACUAACAGCAACAGCUAGAUg 2 27 236 264 [dm3:3R:20073972-20074000:+] 0.4945 145 7 -12.94 -0.3906 MIMAT0000347 dme-miR-283 50070 mask ucUUAAUGGUCGACUAUAAAu || |: :| :|||||||| uuAAAUG-UA-UUGAUAUUUu 2 20 485 503 [dm3:3R:20074221-20074239:+] 0.5050 147 7 -7.93 -0.9402 MIMAT0000347 dme-miR-283 50070 mask ucuuaauggucgacUAUAAAu |||||| auacaucuauauauAUAUUUa 2 8 780 800 [dm3:3R:20074516-20074536:+] 0.5050 120 6 -3.11 -0.1783 MIMAT0000347 dme-miR-283 50070 mask ucUUAAUGGUCGACUAUAAAu || |: :| :|||||||| uuAAAUG-UA-UUGAUAUUUu 2 20 485 503 [dm3:3R:20074221-20074239:+] 0.5050 147 7 -7.93 -1.1588 MIMAT0000347 dme-miR-283 50070 mask ucuuaauggucgacUAUAAAu |||||| auacaucuauauauAUAUUUa 2 8 780 800 [dm3:3R:20074516-20074536:+] 0.5050 120 6 -3.11 -0.3718 MIMAT0000350 dme-miR-34 50070 mask guGUUGGUCGAUU--GG--UGUG-ACGGu ||| || |||| || |||| |||| caCAAACACCUAAACCCAAACACAUGCCc 2 23 1926 1954 [dm3:3R:20075662-20075690:+] 0.5259 132 0 -20.98 -0.2896 MIMAT0000352 dme-miR-79 50070 mask uacgaaaCCAUUA-GAUCGAAAu | ||:| ||||||| gcaugaaGUUAGUGGUAGCUUUu 2 16 512 534 [dm3:3R:20074248-20074270:+] 0.5050 146 7 -10.63 -0.1941 MIMAT0000389 dme-miR-31b 50070 mask gucgauaaggcuGUAGAACGGu | ||||||| uuaacaaaaaccCUUCUUGCCu 2 11 1520 1541 [dm3:3R:20075256-20075277:+] 0.5228 142 7 -12.56 -0.2620 MIMAT0000395 dme-miR-9b 50070 mask guAUGUCGAUUUUA-GUG-GUUUcu || ||:|||||| ||| |||| gcUAAAGUUAAAAUACACACAAAcu 3 22 732 756 [dm3:3R:20074468-20074492:+] 0.5050 128 0 -13.34 -0.1323 MIMAT0000400 dme-miR-31a 50070 mask agucgauacggcuGUAGAACGGu | ||||||| cuuaacaaaaaccCUUCUUGCCu 2 11 1519 1541 [dm3:3R:20075255-20075277:+] 0.5228 142 7 -13.50 -0.2620 MIMAT0005484 dme-miR-968 50070 mask guugggaaauUACCUAUGAUGAAu || || ||||||| uaagugaagcAU-GAAACUACUUu 2 15 1793 1815 [dm3:3R:20075529-20075551:+] 0.5774 148 7 -9.98 -1.0163 MIMAT0005486 dme-miR-970 50070 mask uaucggcgCACACAGAAUACu || |||||||| ggauaaaaGUCAGUCUUAUGa 2 14 680 700 [dm3:3R:20074416-20074436:+] 0.5050 149 7 -13.57 -0.6017 MIMAT0005486 dme-miR-970 50070 mask uaucggcgCACACAGAAUACu || |||||||| ggauaaaaGUCAGUCUUAUGa 2 14 680 700 [dm3:3R:20074416-20074436:+] 0.5050 149 7 -13.57 -0.9181 MIMAT0005518 dme-miR-998 50070 mask cuCG-ACUUAGAGUACCA-CGAu || |||| :| :|||| ||| aaGCAUGAAGUUAGUGGUAGCUu 2 20 510 532 [dm3:3R:20074246-20074268:+] 0.5050 126 0 -17.19 -0.2966 MIMAT0005518 dme-miR-998 50070 mask cuCG-ACUUAGAGUACCA-CGAu || |||| :| :|||| ||| aaGCAUGAAGUUAGUGGUAGCUu 2 20 510 532 [dm3:3R:20074246-20074268:+] 0.5050 126 0 -17.19 -0.5638 MIMAT0005520 dme-miR-1000 50070 mask ugacgacacuguccUGUUAUa |||||| uguucuuuaguuuaACAAUAu 2 8 284 304 [dm3:3R:20074020-20074040:+] 0.4945 120 6 -7.38 -0.1302 MIMAT0005024 dme-miR-1011 50070 mask gacgcucgcuaaacUUGGUUAUu |||||||| gauacuaccaaaccAACCAAUAc 2 10 1083 1105 [dm3:3R:20074819-20074841:+] 0.4793 145 7 -6.85 -0.1804 MIMAT0005027 dme-miR-1014 50070 mask gaCGUUUACU-UUUACUUAAAa |||:: | | :||||||| ucGCAGGCAAUACGUGAAUUUu 2 20 337 358 [dm3:3R:20074073-20074094:+] 0.4945 150 7 -10.41 -0.2155 MIMAT0005027 dme-miR-1014 50070 mask gaCGUUUACUUUU-----ACUUAAAa ||:|| || | ||||||| aaGCGAAAUAAUAUUUUUUGAAUUUg 2 20 139 164 [dm3:3R:20073875-20073900:+] 0.4945 142 7 -6.18 -0.6858 MIMAT0005027 dme-miR-1014 50070 mask gacGUUUACUUUUA-CUUAAAa ::||| || || |||||| uacUGAAUAAAUAUAGAAUUUu 2 19 2112 2133 [dm3:3R:20075848-20075869:+] 0.5524 130 6 -7.00 -0.9042 MIMAT0005027 dme-miR-1014 50070 mask gacGUUUACUUUUACU-UAAAa :||||| | ||| |||| uuuUAAAUG-UAUUGAUAUUUu 2 19 483 503 [dm3:3R:20074219-20074239:+] 0.5050 120 0 -6.79 -0.8142 MIMAT0005027 dme-miR-1014 50070 mask gaCGUUUACU-UUUACUUAAAa |||:: | | :||||||| ucGCAGGCAAUACGUGAAUUUu 2 20 337 358 [dm3:3R:20074073-20074094:+] 0.4945 150 7 -10.41 -0.4345 MIMAT0005027 dme-miR-1014 50070 mask gaCGUUUACUUUU-----ACUUAAAa ||:|| || | ||||||| aaGCGAAAUAAUAUUUUUUGAAUUUg 2 20 139 164 [dm3:3R:20073875-20073900:+] 0.4945 142 7 -6.18 -0.9775 MIMAT0005027 dme-miR-1014 50070 mask gacGUUUACUUUUACU-UAAAa :||||| | ||| |||| uuuUAAAUG-UAUUGAUAUUUu 2 19 483 503 [dm3:3R:20074219-20074239:+] 0.5050 120 0 -6.79 -1.0773

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score mask RAID00056263 dme-miR-973-5p miRNA MIMAT0005489 mask mRNA 50070 Prediction 0.1828 mask RAID00192844 dme-miR-966-5p miRNA MIMAT0005481 mask mRNA 50070 Prediction 0.1828 mask RAID00221030 dme-miR-1011-3p miRNA MIMAT0005024 mask mRNA 50070 Prediction 0.2202 mask RAID00314579 dme-miR-34-5p miRNA MIMAT0000350 mask mRNA 50070 Prediction 0.1828 mask RAID00361397 dme-miR-283-5p miRNA MIMAT0000347 mask mRNA 50070 Prediction 0.2381 mask RAID00448563 dme-miR-929-3p miRNA MIMAT0005511 mask mRNA 50070 Prediction 0.1828 mask RAID00479488 dme-miR-972-3p miRNA MIMAT0005488 mask mRNA 50070 Prediction 0.1828 mask RAID00651116 dme-miR-31a-5p miRNA MIMAT0000400 mask mRNA 50070 Prediction 0.2202 mask RAID00652115 dme-miR-133-3p miRNA MIMAT0000340 mask mRNA 50070 Prediction 0.1828 mask RAID00689037 dme-miR-274-5p miRNA MIMAT0000332 mask mRNA 50070 Prediction 0.1828 mask RAID00763142 dme-miR-33-5p miRNA MIMAT0000342 mask mRNA 50070 Prediction 0.1828 mask RAID00765005 dme-miR-317-3p miRNA MIMAT0000409 mask mRNA 50070 Prediction 0.1828 mask RAID00820418 dme-mir-iab-4 miRNA MI0000432 mask mRNA 50070 Prediction 0.1828 mask RAID01179804 dme-miR-282-5p miRNA MIMAT0000346 mask mRNA 50070 Prediction 0.1828 mask RAID01374771 dme-miR-79-3p miRNA MIMAT0000352 mask mRNA 50070 Prediction 0.2202 mask RAID01394080 dme-miR-375-3p miRNA MIMAT0005472 mask mRNA 50070 Prediction 0.1828 mask RAID01578770 dme-miR-1002-5p miRNA MIMAT0005483 mask mRNA 50070 Prediction 0.1828 mask RAID01735987 dme-miR-1014-3p miRNA MIMAT0005027 mask mRNA 50070 Prediction 0.2202 mask RAID01879580 dme-miR-987-5p miRNA MIMAT0005504 mask mRNA 50070 Prediction 0.1828 mask RAID02164571 dme-miR-970-3p miRNA MIMAT0005486 mask mRNA 50070 Prediction 0.2202 mask RAID02406982 dme-miR-999-3p miRNA MIMAT0005519 mask mRNA 50070 Prediction 0.1828 mask RAID02554743 dme-miR-1013-3p miRNA MIMAT0005026 mask mRNA 50070 Prediction 0.1828 mask RAID02694330 dme-miR-9b-5p miRNA MIMAT0000395 mask mRNA 50070 Prediction 0.1828 mask RAID02725441 dme-miR-31b-5p miRNA MIMAT0000389 mask mRNA 50070 Prediction 0.2381 mask RAID03178150 dme-miR-985-3p miRNA MIMAT0005502 mask mRNA 50070 Prediction 0.1828 mask RAID03217820 dme-miR-998-3p miRNA MIMAT0005518 mask mRNA 50070 Prediction 0.1828 mask RAID03365022 dme-miR-263a-5p miRNA MIMAT0000319 mask mRNA 50070 Prediction 0.1828 mask RAID03518973 dme-miR-976-3p miRNA MIMAT0005492 mask mRNA 50070 Prediction 0.1828 mask RAID03576397 dme-miR-981-3p miRNA MIMAT0005497 mask mRNA 50070 Prediction 0.1828 mask RAID03758551 dme-miR-252-5p miRNA MIMAT0005516 mask mRNA 50070 Prediction 0.1828 mask RAID03772475 dme-miR-932-5p miRNA MIMAT0005479 mask mRNA 50070 Prediction 0.1828 mask RAID03871585 dme-miR-962-5p miRNA MIMAT0005476 mask mRNA 50070 Prediction 0.1828 mask RAID03928365 dme-miR-1000-5p miRNA MIMAT0005520 mask mRNA 50070 Prediction 0.1828 mask RAID04065330 dme-miR-968-5p miRNA MIMAT0005484 mask mRNA 50070 Prediction 0.2202