DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 34096 Cka auAGUAAAGUAUACGUUGCAUUUAUGu | ||| :| || || : ||||||: aaUAAUUAUACAUACAUUAUAAAUAUa 2 26 162 188 [dm3:2L:8038363-8038389:+] 0.5259 153 0 -8.69 -0.3022 MIMAT0010206 dme-miR-995* 34096 Cka gcgucgaggguGUAUUAAGCCc || ||||||| ucgaacgaauuCAGAAUUCGGa 2 12 60 81 [dm3:2L:8038261-8038282:+] 0.4399 147 7 -14.91 -0.2344 MIMAT0011786 dme-miR-2280 34096 Cka uauaaaauaacGGU-UCGAUUCu :|| ||||||| cagccaguaacUCACAGCUAAGc 2 12 121 143 [dm3:2L:8038322-8038344:+] 0.4910 142 7 -12.62 -0.2042 MIMAT0011790 dme-miR-2282 34096 Cka uaAGAUAAAAAUCGAG-UGGCUa |||| || || :|| ||||| aaUCUAAUUAUACUUCAACCGAg 2 21 200 222 [dm3:2L:8038401-8038423:+] 0.5259 136 0 -12.85 -1.2012 MIMAT0012196 dme-miR-2489 34096 Cka ugacGUUUAUGU-UGUAUGUUAu ||| ||:| :|||||||| caacCAAUUAUAUGCAUACAAUa 2 19 228 250 [dm3:2L:8038429-8038451:+] 0.5259 165 7 -14.79 -1.0275 MIMAT0012196 dme-miR-2489 34096 Cka ugacGUU-UAUGUUGUAUGUUau ||| ||| ||||||||| aacaCAACAUA-AACAUACAAau 3 19 269 290 [dm3:2L:8038470-8038491:+] 0.5259 147 0 -11.45 -0.1546 MIMAT0012196 dme-miR-2489 34096 Cka ugACGUUUAUGUUGUAUGU-UAu | :|||||:| :||||| || auUAUAAAUAUACUAUACAUAUa 2 21 177 199 [dm3:2L:8038378-8038400:+] 0.5259 136 0 -12.14 -1.3067 MIMAT0012196 dme-miR-2489 34096 Cka ugacGUUUAU--GU-UGUAUGUUAu :||||| :| ||||||| | gaguUAAAUAAUUAUACAUACAUUa 2 19 156 180 [dm3:2L:8038357-8038381:+] 0.5259 128 0 -9.96 -0.1572 MIMAT0012199 dme-miR-2492 34096 Cka aaacUUUCGAGAGCUGU-UUUGUa |:|| | | ||| ||||| gaaaAGAGAACACAACAUAAACAu 2 20 261 284 [dm3:2L:8038462-8038485:+] 0.5259 123 0 -8.67 -1.0846 MIMAT0005467 dme-miR-190 34096 Cka guUGGUUCUUAUA--GUUUGUAUAga |::| ||||| :| |||||| acAUUAUAAAUAUACUAUACAUAUaa 3 23 175 200 [dm3:2L:8038376-8038401:+] 0.5259 141 0 -8.98 -0.3874 MIMAT0005520 dme-miR-1000 34096 Cka ugacgacacuguccUGUUAUa |||||| ccaauuauaugcauACAAUAa 2 8 231 251 [dm3:2L:8038432-8038452:+] 0.5259 120 6 -5.41 -0.1721 MIMAT0005024 dme-miR-1011 34096 Cka gacGCUCGCUAAACUUGGUUAuu |||| | ||||||| aacCGAG-AACAACAACCAAUua 3 21 216 237 [dm3:2L:8038417-8038438:+] 0.5259 126 0 -13.54 -0.1649

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cka RAID02446780 dme-miR-193-3p miRNA MIMAT0005468 Cka mRNA 34096 Prediction 0.1828 Cka RAID02773490 dme-miR-190-5p miRNA MIMAT0005467 Cka mRNA 34096 Prediction 0.1828 Cka RAID03178151 dme-miR-1000-5p miRNA MIMAT0005520 Cka mRNA 34096 Prediction 0.2202 Cka RAID03463232 dme-miR-1011-3p miRNA MIMAT0005024 Cka mRNA 34096 Prediction 0.1828 Cka RAID03480257 dme-miR-966-5p miRNA MIMAT0005481 Cka mRNA 34096 Prediction 0.1828