DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005509 dme-miR-991 35783 CG30372 ugaAAGGU-UUGAU----GUUGAAAUu | ||| ||||| :||||||| ucgUACCAUAACUAGAUCUAACUUUAa 2 20 339 365 [dm3:2R:4002406-4002432:-] 0.5105 153 7 -15.01 -1.0796 MIMAT0005025 dme-miR-1012 35783 CG30372 gauaccccUUUUAGAAACUGAUu |||: |||||||| uuuaucacAAAGCGUUUGACUAu 2 16 130 152 [dm3:2R:4002619-4002641:-] 0.5105 155 7 -9.50 -1.0223 MIMAT0011784 dme-miR-2279* 35783 CG30372 uuaaagugugugucuAUAAAUu |||||| uauaaaacaaguuuuUAUUUAu 2 8 99 120 [dm3:2R:4002651-4002672:-] 0.5105 120 6 -3.76 -0.1086 MIMAT0011791 dme-miR-2283 35783 CG30372 uaacAGCAUAAGUA---CU-AUAAAAg |: ||||:|| || |||||| aaguUUUUAUUUAUUACGACUAUUUUa 2 20 107 133 [dm3:2R:4002638-4002664:-] 0.5105 126 6 -5.68 -1.1112 MIMAT0012199 dme-miR-2492 35783 CG30372 aaacUUUCGAGAGCUGUUUUGUa || | | | |:|||||| cucuAAUGAUAU--AUAAAACAa 2 20 88 108 [dm3:2R:4002663-4002683:-] 0.5105 132 6 -8.30 -0.2731 MIMAT0012208 dme-miR-2497* 35783 CG30372 uuGUUGAUGUAAAACG-UUACGA-AUg ::| ||::| ||| |||||| || acUGAAUAUGUCCUGCAAAUGCUGUAa 2 24 311 337 [dm3:2R:4002434-4002460:-] 0.5105 130 0 -10.00 -1.0855 MIMAT0012210 dme-miR-2498* 35783 CG30372 guuuuuauucgUAUUGUCGGAAAu || | ||||||| cuuguauuucaAUCAAAGCCUUUa 2 14 228 251 [dm3:2R:4002520-4002543:-] 0.5105 149 7 -10.92 -1.1591 MIMAT0000332 dme-miR-274 35783 CG30372 uaAUGGGCAAU-C--A-CAGCCAGUGUUUu ||::: ||| | | |: ||||||| uuUAUUUAUUACGACUAUUUUAUCACAAAg 2 25 112 141 [dm3:2R:4002630-4002659:-] 0.5105 141 7 -13.57 -0.9863 MIMAT0000338 dme-miR-277 35783 CG30372 acaGCAUGGUCUAUCACGUAAAu || |: | | |||||||| uagCGAUCUUGCU-GUGCAUUUc 2 21 254 275 [dm3:2R:4002496-4002517:-] 0.5105 150 7 -14.20 -0.1429 MIMAT0000346 dme-miR-282 35783 CG30372 ugucuguuucggaucaucuccGAUCUAa |||||| augcuguaauucguaccauaaCUAGAUc 2 8 329 356 [dm3:2R:4002415-4002442:-] 0.5105 120 6 -9.76 -0.1017 MIMAT0000407 dme-miR-315 35783 CG30372 cgaaagacucguuGUUAGUUUu |||||||| uacacuuguauuuCAAUCAAAg 2 10 224 245 [dm3:2R:4002526-4002547:-] 0.5105 145 7 -12.07 -0.4397 MIMAT0005467 dme-miR-190 35783 CG30372 guUGGUUCU-UAUAGUUUG-UAUAGa |: || | ||| | ||| ||||| ccAUAAACAGAUA-CUAACGAUAUCc 2 23 458 482 [dm3:2R:4002289-4002313:-] 0.5412 123 0 -6.48 -0.3400 MIMAT0005477 dme-miR-963 35783 CG30372 cuUUGUUGGACUA-UAAAUG-GAACa |:| | || | |||||| |||| gaAGCCAACUACUCAUUUACACUUGu 2 23 207 232 [dm3:2R:4002539-4002564:-] 0.5105 129 0 -16.35 -1.0651

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Asap RAID00104074 dme-miR-1013-3p miRNA MIMAT0005026 Asap mRNA 35783 Prediction 0.1828 Asap RAID00414887 dme-miR-315-5p miRNA MIMAT0000407 Asap mRNA 35783 Prediction 0.2202 Asap RAID00524530 dme-miR-190-5p miRNA MIMAT0005467 Asap mRNA 35783 Prediction 0.1828 Asap RAID00566025 dme-miR-963-5p miRNA MIMAT0005477 Asap mRNA 35783 Prediction 0.1828 Asap RAID00833428 dme-miR-8-3p miRNA MIMAT0000113 Asap mRNA 35783 Prediction 0.2202 Asap RAID00913469 dme-bantam-3p miRNA MIMAT0000365 Asap mRNA 35783 Prediction 0.1828 Asap RAID00921215 dme-miR-263a-5p miRNA MIMAT0000319 Asap mRNA 35783 Prediction 0.1828 Asap RAID00979807 dme-miR-1012-3p miRNA MIMAT0005025 Asap mRNA 35783 Prediction 0.1828 Asap RAID01401752 dme-miR-991-3p miRNA MIMAT0005509 Asap mRNA 35783 Prediction 0.1828 Asap RAID01888581 dme-miR-4-3p miRNA MIMAT0000109 Asap mRNA 35783 Prediction 0.1828 Asap RAID01961346 dme-miR-283-5p miRNA MIMAT0000347 Asap mRNA 35783 Prediction 0.1828 Asap RAID02056028 dme-mir-307a miRNA MI0000418 Asap mRNA 35783 Prediction 0.1828 Asap RAID02279760 dme-miR-274-5p miRNA MIMAT0000332 Asap mRNA 35783 Prediction 0.2202 Asap RAID02821022 dme-miR-282-5p miRNA MIMAT0000346 Asap mRNA 35783 Prediction 0.1828 Asap RAID03496994 dme-miR-987-5p miRNA MIMAT0005504 Asap mRNA 35783 Prediction 0.1828 Asap RAID03721493 dme-miR-277-3p miRNA MIMAT0000338 Asap mRNA 35783 Prediction 0.2202