DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 2768883 Sdic2 auaguaaagUAUACGU-UGCAUUUAUGu ||| || | |:||||| agaauagagAUAAACAUAAAUGAAUACa 2 19 255 282 [dm3:X:20076078-20076105:-] 0.5042 133 0 -8.29 -0.1252 MIMAT0005464 dme-miR-iab-4as-3p 2768883 Sdic2 auUUGCAUAUGACUUACAUAGg ||: |:||:| |||||| uuAAUUUGUAUU-UUUGUAUCu 2 21 75 95 [dm3:X:20076265-20076285:-] 0.5257 126 6 -10.66 -0.1269 MIMAT0011788 dme-miR-2281* 2768883 Sdic2 aacguagacgucgacgUCUAUUa |||||| aaacucgauagaauagAGAUAAa 2 8 246 268 [dm3:X:20076092-20076114:-] 0.5042 120 6 -11.44 -0.3158 MIMAT0012216 dme-miR-2501 2768883 Sdic2 aaUCGGGUCCGUGAGGUUUGAAUg |||||| | |||| ||||||| auAGCCCA-GAACUCAAAACUUAa 2 23 117 139 [dm3:X:20076221-20076243:-] 0.5257 180 7 -27.59 -0.7142 MIMAT0000111 dme-miR-6 2768883 Sdic2 uuuuucuuGUCGGUGACAC-UAu | ||:|||||| || uugugaucCCGCUACUGUGUAUa 2 15 97 119 [dm3:X:20076241-20076263:-] 0.5257 122 0 -14.99 -0.3946 MIMAT0000412 dme-miR-iab-4-5p 2768883 Sdic2 aguCCUAUGUAAGU-CAUAUGCa | |||||| :| |||||| aauGAAUACAUAUAUAUAUACGa 2 20 273 295 [dm3:X:20076065-20076087:-] 0.4828 134 6 -11.07 -0.3375 MIMAT0005467 dme-miR-190 2768883 Sdic2 guUGGUUCU-UAUAGUU-UGUAUAga |: || | | || || |||||| agAUAAACAUAAAUGAAUACAUAUau 3 23 262 287 [dm3:X:20076073-20076098:-] 0.5042 136 0 -7.26 -0.1334 MIMAT0005472 dme-miR-375 2768883 Sdic2 auUGAAU-UCGGUUUGCUUGUUu || || | :| ||||| || auACAUAUAUAUAUACGAAGAAu 2 21 278 300 [dm3:X:20076060-20076082:-] 0.4828 123 0 -6.14 -0.1041 MIMAT0005519 dme-miR-999 2768883 Sdic2 ucugugucagaAUGUCAAUUGu ||:||||||| ------gacgaUAUAGUUAACu 2 12 1 16 [dm3:X:20076344-20076359:-] 0.6505 151 7 -12.62 -1.2293

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sdic2 RAID00045303 dme-miR-6-3p miRNA MIMAT0000111 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic2 RAID00080649 dme-miR-277-3p miRNA MIMAT0000338 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic4 RAID00325131 dme-miR-6-3p miRNA MIMAT0000111 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic2 RAID00351167 dme-miR-190-5p miRNA MIMAT0005467 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic4 RAID00365351 dme-miR-277-3p miRNA MIMAT0000338 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic2 RAID00502000 dme-mir-iab-4 miRNA MI0000432 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic4 RAID00640717 dme-miR-190-5p miRNA MIMAT0005467 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID00767726 dme-mir-iab-4 miRNA MI0000432 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic2 RAID00923792 dme-miR-1-3p miRNA MIMAT0000105 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic4 RAID01100858 dme-miR-981-3p miRNA MIMAT0005497 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID01201164 dme-miR-969-5p miRNA MIMAT0005485 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID01211755 dme-miR-1-3p miRNA MIMAT0000105 Sdic4 mRNA 2768886 Prediction 0.2202 Sdic2 RAID01318395 dme-miR-963-5p miRNA MIMAT0005477 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic4 RAID01593477 dme-miR-963-5p miRNA MIMAT0005477 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic2 RAID01661160 dme-miR-375-3p miRNA MIMAT0005472 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic2 RAID01847735 dme-miR-999-3p miRNA MIMAT0005519 Sdic2 mRNA 2768883 Prediction 0.2202 Sdic4 RAID01959954 dme-miR-304-5p miRNA MIMAT0000390 Sdic4 mRNA 2768886 Prediction 0.2381 Sdic4 RAID02131286 dme-miR-999-3p miRNA MIMAT0005519 Sdic4 mRNA 2768886 Prediction 0.2202 Sdic2 RAID02396445 dme-miR-iab-4-5p miRNA MIMAT0000412 Sdic2 mRNA 2768883 Prediction 0.1828 Sdic4 RAID02445327 dme-miR-33-5p miRNA MIMAT0000342 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID02567456 dme-miR-976-3p miRNA MIMAT0005492 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID02696256 dme-miR-iab-4-5p miRNA MIMAT0000412 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID02987605 dme-miR-977-3p miRNA MIMAT0005493 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID03473420 dme-miR-993-3p miRNA MIMAT0005512 Sdic4 mRNA 2768886 Prediction 0.1828 Sdic4 RAID03631793 dme-miR-957-3p miRNA MIMAT0005470 Sdic4 mRNA 2768886 Prediction 0.2202