DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 37857 snama ucagcguccgaggUGAAUUUAUAAau |: |||||||| cgagauaagaaugAUAUAAAUAUUga 3 14 15 40 [dm3:2R:19979430-19979455:+] 0.4838 133 0 -5.27 -0.1474 MIMAT0005510 dme-miR-992 37857 snama gaAUCAUGGUCU--UUGCACAUGa || |: ||| ||:|||||| aaUAUUG-AAGAUUAAUGUGUACa 2 21 33 55 [dm3:2R:19979448-19979470:+] 0.4838 137 6 -12.10 -0.3623 MIMAT0011788 dme-miR-2281* 37857 snama aacguagacgucgacgUCUAUUa |||||| guuacgguaggcuacgAGAUAAg 2 8 1 23 [dm3:2R:19979416-19979438:+] 0.4838 120 6 -11.18 -0.1257 MIMAT0011789 dme-miR-2281 37857 snama cguuAUGACGUCU-AUG-UCUAu ||| |:||: ||| |||| --guUACGGUAGGCUACGAGAUa 2 18 1 21 [dm3:2R:19979416-19979436:+] 0.4838 124 0 -13.33 -1.0630 MIMAT0012196 dme-miR-2489 37857 snama ugACGUUUAUGUU-GUAUGUUau ||||| ||:|| :|||||| caUGCAACUAUAAGUAUACAAau 3 21 85 107 [dm3:2R:19979500-19979522:+] 0.5202 155 0 -13.96 -0.1417 MIMAT0012199 dme-miR-2492 37857 snama aaacuUUCGAGAG-CUGUUUUGUa |||: : | |:|||||| acuauAAGUAUACAAAUAAAACAg 2 19 91 114 [dm3:2R:19979506-19979529:+] 0.5202 133 6 -6.32 -0.1036 MIMAT0012209 dme-miR-2497 37857 snama gacGUUUGUAACAUUUACA-ACa |||| ||| | ||||| || aauCAAAGAUUUUUAAUGUAUGu 2 20 56 78 [dm3:2R:19979471-19979493:+] 0.4838 135 0 -10.16 -1.1237 MIMAT0000390 dme-miR-304 37857 snama gagugUAAAUGUUUAAC-UCUAAu || || | |||| ||||| gaaugAUAUAAAUAUUGAAGAUUa 2 19 23 46 [dm3:2R:19979438-19979461:+] 0.4838 130 0 -9.04 -1.2628 MIMAT0000391 dme-miR-305 37857 snama gucucguggacuacuuCAUGUUa |||||| uauugaagauuaauguGUACAAa 2 8 35 57 [dm3:2R:19979450-19979472:+] 0.4838 120 6 -8.74 -0.2527 MIMAT0000407 dme-miR-315 37857 snama cgAAAGACUCGUUGUUAGUUUu || || |:| ||||||| gaUUAAUGUGUACAAAUCAAAg 2 21 42 63 [dm3:2R:19979457-19979478:+] 0.4838 156 7 -9.65 -0.9948 MIMAT0000412 dme-miR-iab-4-5p 37857 snama agUCCUAUGUAAGUCAUAUGca | | || | ||||||| ucAUGCAACUAUAAGUAUACaa 3 21 84 105 [dm3:2R:19979499-19979520:+] 0.5202 132 0 -9.00 -0.3810 MIMAT0000413 dme-miR-iab-4-3p 37857 snama caaUGCAUAUGACUUCCAUAUGgc |:| | ||| | |||||| aucAUGCA-ACUAUAAGUAUACaa 3 22 83 105 [dm3:2R:19979498-19979520:+] 0.5202 135 0 -8.76 -0.3810

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score snama RAID00121558 dme-miR-304-5p miRNA MIMAT0000390 snama mRNA 37857 Prediction 0.1828 snama RAID01137832 dme-miR-5-5p miRNA MIMAT0000110 snama mRNA 37857 Prediction 0.1828 snama RAID01493085 dme-miR-iab-4-5p miRNA MIMAT0000412 snama mRNA 37857 Prediction 0.1828 snama RAID02091719 dme-miR-iab-4-3p miRNA MIMAT0000413 snama mRNA 37857 Prediction 0.1828 snama RAID02328763 dme-miR-305-5p miRNA MIMAT0000391 snama mRNA 37857 Prediction 0.2202 snama RAID02493900 dme-miR-315-5p miRNA MIMAT0000407 snama mRNA 37857 Prediction 0.2202 snama RAID02695511 dme-miR-992-3p miRNA MIMAT0005510 snama mRNA 37857 Prediction 0.1828