DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 37216 Tab2 auaguaaaguaUACGUUGCAUUUAUGu | |: |: ||||||: guaaauaaagaACGUUAUUUAAAUAUu 2 17 360 386 [dm3:2R:15191498-15191524:+] 0.5625 132 0 -7.57 -0.1339 MIMAT0000364 dme-miR-289 37216 Tab2 ucagcguccGAGGUGAAUUUAUAAAu | ::|:|||||||||| aauaaagaaCGUUAUUUAAAUAUUUa 2 18 363 388 [dm3:2R:15191501-15191526:+] 0.5625 165 7 -13.90 -1.2128 MIMAT0011784 dme-miR-2279* 37216 Tab2 uuaaaguGUGUGUCUAUAAAUu :|: :| ||||||| agaacguUAUUUAAAUAUUUAc 2 16 368 389 [dm3:2R:15191506-15191527:+] 0.5625 147 7 -4.76 -0.9533 MIMAT0011787 dme-miR-2280* 37216 Tab2 agUCAAUCGAACCUUCAUUUAa || ||| |||||||| uuAGCCCGCUCAAAAGUAAAUa 2 21 345 366 [dm3:2R:15191483-15191504:+] 0.5625 152 7 -9.69 -1.2256 MIMAT0011791 dme-miR-2283 37216 Tab2 uaaCAGCAUAAGUACUAUAAAAg | | | ||:| |||||| cgcGGCCUUUUUAAAUUAUUUUa 2 21 201 223 [dm3:2R:15191339-15191361:+] 0.5027 124 6 -4.91 -0.2127 MIMAT0012198 dme-miR-2491 37216 Tab2 ucguugacGUUUCCGUUGUCGc |:|| ||||||| gugcgaaaCGAAAACAACAGCg 2 15 158 179 [dm3:2R:15191296-15191317:+] 0.5027 150 7 -21.01 -0.6483 MIMAT0000106 dme-miR-2a 37216 Tab2 cgaguAGUUUCGAC--CGACACUAu ||:| :|| ||||||| caugcUCGACUUUGAAACUGUGAUa 2 19 73 97 [dm3:2R:15191211-15191235:+] 0.5027 145 7 -18.30 -1.1170 MIMAT0000107 dme-miR-2b 37216 Tab2 cgAGGAGUUUCGAC--CGACACUAu | |||:| :|| ||||||| caUGCUCGACUUUGAAACUGUGAUa 2 22 73 97 [dm3:2R:15191211-15191235:+] 0.5027 152 7 -19.09 -1.1170 MIMAT0000111 dme-miR-6 37216 Tab2 uuuuucuugucggUGACACUAu |||||||| gcucgacuuugaaACUGUGAUa 2 10 76 97 [dm3:2R:15191214-15191235:+] 0.5027 145 7 -14.57 -1.1148 MIMAT0000116 dme-miR-11 37216 Tab2 cguuCUUGAG-UCUGACACUAc || :|: | |||||||| gcucGACUUUGAAACUGUGAUa 2 18 76 97 [dm3:2R:15191214-15191235:+] 0.5027 152 7 -12.95 -1.1103 MIMAT0000118 dme-miR-13a 37216 Tab2 ugaGUAGUUUUACCGACACUAu | |::||| ||||||| cgaCUUUGAAA---CUGUGAUa 2 20 79 97 [dm3:2R:15191217-15191235:+] 0.5027 147 7 -12.05 -1.0969 MIMAT0000119 dme-miR-13b 37216 Tab2 ugaGCAGUUUUACCGACACUAu | |::||| ||||||| cgaCUUUGAAA---CUGUGAUa 2 20 79 97 [dm3:2R:15191217-15191235:+] 0.5027 147 7 -12.05 -1.0969 MIMAT0000342 dme-miR-33 37216 Tab2 guuacgcugauguuACGUGGa |||||| ----cccaaaaagcUGCACCa 2 8 1 17 [dm3:2R:15191139-15191155:+] 0.5027 120 6 -7.85 -0.2904 MIMAT0000399 dme-miR-308 37216 Tab2 gagugUCAUAUUAGGACACUAa | | |:| ||||||| gcucgACUUUGAAACUGUGAUa 2 18 76 97 [dm3:2R:15191214-15191235:+] 0.5027 149 7 -16.33 -1.1125 MIMAT0000409 dme-miR-317 37216 Tab2 ugAC-CUAUGGUGGUC-GAC-ACAAGu || | || | || | ||| ||||| caUGAGCUAGCUCCUGACUGUUGUUCu 2 23 44 70 [dm3:2R:15191182-15191208:+] 0.5027 124 0 -17.11 -0.3660 MIMAT0000411 dme-miR-2c 37216 Tab2 cggguAGUUUCGAC--CGACACUAu ||:| :|| ||||||| caugcUCGACUUUGAAACUGUGAUa 2 19 73 97 [dm3:2R:15191211-15191235:+] 0.5027 145 7 -17.37 -1.1170 MIMAT0005467 dme-miR-190 37216 Tab2 guuGGUUCUUAU-AGUUUGUAUAGa ::|| | || |: |||||||: uuuUUAA-AUUAUUUUAACAUAUUc 2 22 208 231 [dm3:2R:15191346-15191369:+] 0.5027 138 0 -6.19 -0.1055 MIMAT0005490 dme-miR-974 37216 Tab2 uuaUGAUG--AAGAA---ACGAGC-GAa |||:: ||||| |||||| || cugACUGUUGUUCUUGCAUGCUCGACUu 2 20 57 84 [dm3:2R:15191195-15191222:+] 0.5027 121 0 -17.35 -0.6157 MIMAT0005503 dme-miR-986 37216 Tab2 agucAGUGUUGCGAUAAGCUcu |: :||| ||||||| auuaUUUUAAC-AUAUUCGAuu 3 19 215 235 [dm3:2R:15191353-15191373:+] 0.5326 132 0 -8.26 -0.1341 MIMAT0005507 dme-miR-137 37216 Tab2 gaugcACAUAAGAGUU-CGUUAu |||| :| || ||||| auguaUGUACAUUAAAUGCAAUc 2 18 237 259 [dm3:2R:15191375-15191397:+] 0.5625 121 0 -8.44 -0.7038

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tab2 RAID00127574 dme-miR-190-5p miRNA MIMAT0005467 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID00142452 dme-mir-2a-2 miRNA MI0000118 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID00454401 dme-mir-6-1 miRNA MI0000124 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID00562829 dme-miR-2b-3p miRNA MIMAT0000107 Tab2 mRNA 37216 Prediction 0.2202 Tab2 RAID00838353 dme-miR-13b-3p miRNA MIMAT0000119 Tab2 mRNA 37216 Prediction 0.2202 Tab2 RAID01057091 dme-miR-137-3p miRNA MIMAT0005507 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID01075163 dme-mir-13b-2 miRNA MI0000135 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID01372134 dme-mir-2a-1 miRNA MI0000117 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID01412552 dme-miR-2a-3p miRNA MIMAT0000106 Tab2 mRNA 37216 Prediction 0.2202 Tab2 RAID01644366 dme-mir-2b-1 miRNA MI0000119 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID01710264 dme-miR-13a-3p miRNA MIMAT0000118 Tab2 mRNA 37216 Prediction 0.2381 Tab2 RAID01718694 dme-miR-2c-3p miRNA MIMAT0000411 Tab2 mRNA 37216 Prediction 0.2381 Tab2 RAID01844168 dme-miR-11-3p miRNA MIMAT0000116 Tab2 mRNA 37216 Prediction 0.2381 Tab2 RAID01945040 dme-miR-33-5p miRNA MIMAT0000342 Tab2 mRNA 37216 Prediction 0.2202 Tab2 RAID01979621 dme-miR-317-3p miRNA MIMAT0000409 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID02010467 dme-mir-6-3 miRNA MI0000126 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID02148665 dme-miR-6-3p miRNA MIMAT0000111 Tab2 mRNA 37216 Prediction 0.2381 Tab2 RAID02306760 dme-miR-308-3p miRNA MIMAT0000399 Tab2 mRNA 37216 Prediction 0.2381 Tab2 RAID02333050 dme-mir-13b-1 miRNA MI0000134 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID02724811 dme-mir-2b-2 miRNA MI0000120 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID02738832 dme-miR-974-5p miRNA MIMAT0005490 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID03224790 dme-miR-316-5p miRNA MIMAT0000408 Tab2 mRNA 37216 Prediction 0.2202 Tab2 RAID03240789 dme-mir-6-2 miRNA MI0000125 Tab2 mRNA 37216 Prediction 0.1828 Tab2 RAID03363696 dme-miR-277-3p miRNA MIMAT0000338 Tab2 mRNA 37216 Prediction 0.2381 Tab2 RAID03955170 dme-miR-986-5p miRNA MIMAT0005503 Tab2 mRNA 37216 Prediction 0.1828