DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005502 dme-miR-985 36409 Nacalpha acgggcUGGUAACCUUGUAAAc |||| | |||||||| uguuacACCAGUCGAACAUUUa 2 17 98 119 [dm3:2R:8647248-8647269:-] 0.5103 164 7 -14.46 -0.7660 MIMAT0005502 dme-miR-985 36409 Nacalpha acgggcUGGUAACCUUGUAAAc |||| | |||||||| uguuacACCAGUCGAACAUUUa 2 17 98 119 [dm3:2R:8647248-8647269:-] 0.5103 164 7 -14.46 -0.8100 MIMAT0005521 dme-miR-1001 36409 Nacalpha acuagGAACCCUCAAAUGGGu :|| | |||||||| ccugaUUUUGUUGUUUACCCg 2 17 26 46 [dm3:2R:8647321-8647341:-] 0.5350 152 7 -19.25 -0.5163 MIMAT0005521 dme-miR-1001 36409 Nacalpha acuagGAACCCUCAAAUGGGu :|| | |||||||| ccugaUUUUGUUGUUUACCCg 2 17 26 46 [dm3:2R:8647321-8647341:-] 0.5350 152 7 -19.25 -0.5153 MIMAT0011784 dme-miR-2279* 36409 Nacalpha uuaaaGUGUGUGUCUAUAAAuu ||: :| |||||| ucgaaCAUUUAAUUAUAUUUca 3 18 109 130 [dm3:2R:8647237-8647258:-] 0.5103 125 0 -4.34 -0.2737 MIMAT0011784 dme-miR-2279* 36409 Nacalpha uuaaaGUGUGUGUCUAUAAAuu ||: :| |||||| ucgaaCAUUUAAUUAUAUUUca 3 18 109 130 [dm3:2R:8647237-8647258:-] 0.5103 125 0 -4.34 -0.2715 MIMAT0011791 dme-miR-2283 36409 Nacalpha uaaCAGCAU---AAGUACUAUAAAag |||| | || || |||||| ccaGUCGAACAUUUAAUUAUAUUUca 3 21 105 130 [dm3:2R:8647237-8647262:-] 0.5103 139 0 -10.28 -0.2690 MIMAT0011791 dme-miR-2283 36409 Nacalpha uaaCAGCAU---AAGUACUAUAAAag |||| | || || |||||| ccaGUCGAACAUUUAAUUAUAUUUca 3 21 105 130 [dm3:2R:8647237-8647262:-] 0.5103 139 0 -10.28 -0.2668 MIMAT0012209 dme-miR-2497 36409 Nacalpha gacguUUGUAAC---AUUUACAACa ||:| || |||||||| ucgauAAUACUGACCCAAAUGUUGu 2 18 51 75 [dm3:2R:8647292-8647316:-] 0.5103 148 7 -10.63 -0.4017 MIMAT0012209 dme-miR-2497 36409 Nacalpha gacguUUGUAAC---AUUUACAACa ||:| || |||||||| ucgauAAUACUGACCCAAAUGUUGu 2 18 51 75 [dm3:2R:8647292-8647316:-] 0.5103 148 7 -10.63 -0.4008 MIMAT0000338 dme-miR-277 36409 Nacalpha acAGCAUGGUCUAUCACGUAAAu || || :| | | || |||| cgUCUUAAUA-AAAAUGGAUUUa 2 22 139 160 [dm3:2R:8647207-8647228:-] 0.5103 123 0 -6.81 -0.1357 MIMAT0000347 dme-miR-283 36409 Nacalpha ucuuaauggucgacUAUAAAu |||||| ucgaacauuuaauuAUAUUUc 2 8 109 129 [dm3:2R:8647238-8647258:-] 0.5103 120 6 -2.36 -0.1861 MIMAT0000347 dme-miR-283 36409 Nacalpha ucuuaauggucgacUAUAAAu |||||| ucgaacauuuaauuAUAUUUc 2 8 109 129 [dm3:2R:8647238-8647258:-] 0.5103 120 6 -2.36 -0.1856 MIMAT0005027 dme-miR-1014 36409 Nacalpha gacguUUACUUUUACUUAAAa ||| ||||||:|||| gucuuAAUAAAAAUGGAUUUa 2 17 140 160 [dm3:2R:8647207-8647227:-] 0.5103 156 0 -9.13 -0.1318

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Nacalpha RAID00060384 dme-miR-283-5p miRNA MIMAT0000347 Nacalpha mRNA 36409 Prediction 0.1828 Nacalpha RAID00561534 dme-miR-277-3p miRNA MIMAT0000338 Nacalpha mRNA 36409 Prediction 0.1828 Nacalpha RAID01296766 dme-miR-1001-5p miRNA MIMAT0005521 Nacalpha mRNA 36409 Prediction 0.1828 Nacalpha RAID02045473 dme-miR-985-3p miRNA MIMAT0005502 Nacalpha mRNA 36409 Prediction 0.1828 Nacalpha RAID02356057 dme-miR-1014-3p miRNA MIMAT0005027 Nacalpha mRNA 36409 Prediction 0.1828