DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 36794 CG8445 auaguaaAGUAUACGUU----GCAUUUAUGu ||| ||||:: : ||||||| guaacacUCAAAUGCGGUUCUUUUAAAUACg 2 21 139 169 [dm3:2R:12081771-12081801:-] 0.4978 151 7 -14.54 -0.9122 MIMAT0000364 dme-miR-289 36794 CG8445 ucaGCGUCCGAGGUGAAUUUAUAAAu | :| | : |: || |||||| uuaCAUAUGAAUAAUAUAUAUAUUUu 2 24 298 323 [dm3:2R:12081617-12081642:-] 0.4978 123 6 -5.06 -0.1274 MIMAT0005517 dme-miR-997 36794 CG8445 acuuugaggaagcUCAAACcc |||||| uuuuuaagaauacAGUUUGca 3 9 27 47 [dm3:2R:12081893-12081913:-] 0.4673 120 0 -5.27 -0.1131 MIMAT0005018 dme-miR-1005 36794 CG8445 gacgcuuaauuucUAAGGUCu ||||||| uuuaagaccauucAUUCCAGu 2 9 50 70 [dm3:2R:12081870-12081890:-] 0.4673 140 7 -9.18 -0.8146 MIMAT0011784 dme-miR-2279* 36794 CG8445 uuaaagugUGUGUCUAUAAAuu |:|:| |||||| uaugaauaAUAUAUAUAUUUuc 3 15 303 324 [dm3:2R:12081616-12081637:-] 0.4978 134 0 -5.22 -0.1545 MIMAT0011791 dme-miR-2283 36794 CG8445 uaacagcaUAAGUACUAUAAAAg || :|| ||||||| uaugaauaAUAUAU-AUAUUUUc 2 16 303 324 [dm3:2R:12081616-12081637:-] 0.4978 149 7 -6.44 -1.1473 MIMAT0000105 dme-miR-1 36794 CG8445 gagguaugaagaaauGUAAGGu |||||| auuuuuaagaccauuCAUUCCa 2 8 47 68 [dm3:2R:12081872-12081893:-] 0.4673 120 6 -13.14 -0.1154 MIMAT0000113 dme-miR-8 36794 CG8445 cugUAGAAAUGGACUGUCAUAAu | | || | | ||||||| aagACCAUU-CAUUCCAGUAUUg 2 21 53 74 [dm3:2R:12081866-12081887:-] 0.4586 146 7 -10.30 -0.5967 MIMAT0000319 dme-miR-263a 36794 CG8445 cacuuaagaaggUCACGGUAAUUg || ||||||| uccccaccaagaAGCACCAUUAAc 2 13 88 111 [dm3:2R:12081829-12081852:-] 0.4499 144 7 -12.49 -0.5081 MIMAT0000338 dme-miR-277 36794 CG8445 acagcAUGGUCUAUCACGUAAAu || ||| | ||||||| aagaaUA-CAGUU--UGCAUUUu 2 19 32 51 [dm3:2R:12081889-12081908:-] 0.4673 145 7 -10.06 -1.0174 MIMAT0000338 dme-miR-277 36794 CG8445 acagcauGGUCUAU-C--ACGUAAau ||| ||: | |||||| gaaggacCCAAAUGUGUAUGCAUUac 3 17 276 301 [dm3:2R:12081639-12081664:-] 0.4978 126 0 -8.47 -0.1042 MIMAT0005493 dme-miR-977 36794 CG8445 aaucuguugcacuUAUAGAgu |||||| uauuuucugauauAUAUCUau 3 9 318 338 [dm3:2R:12081602-12081622:-] 0.4978 120 0 -5.06 -0.1002 MIMAT0005496 dme-miR-980 36794 CG8445 auucgggaAG-UGUUCCGUCGAu || || ||||||| auacgaaaUCAACUUGGCAGCUu 2 15 165 187 [dm3:2R:12081753-12081775:-] 0.4978 145 7 -15.87 -1.1220

DNA & RNA Element - miRecords Gene Name miRNA Species miRNA Mature ID miRNA Regulation Target Site Position Pubmed ID CG8445 Drosophila melanogaster dme-miR-8 NA NA 20005803

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score calypso RAID01344220 dme-miR-263a-5p miRNA MIMAT0000319 calypso mRNA 36794 Prediction 0.1828 calypso RAID01392006 dme-miR-977-3p miRNA MIMAT0005493 calypso mRNA 36794 Prediction 0.1828 calypso RAID02790757 dme-miR-277-3p miRNA MIMAT0000338 calypso mRNA 36794 Prediction 0.2202 calypso RAID03059527 dme-miR-1005-3p miRNA MIMAT0005018 calypso mRNA 36794 Prediction 0.1828 calypso RAID03100894 dme-miR-980-3p miRNA MIMAT0005496 calypso mRNA 36794 Prediction 0.2202 calypso RAID03624243 dme-miR-8-3p miRNA MIMAT0000113 calypso mRNA 36794 Prediction 0.2202 calypso RAID03682882 dme-miR-1-3p miRNA MIMAT0000105 calypso mRNA 36794 Prediction 0.2202 calypso RAID03811918 dme-miR-1013-3p miRNA MIMAT0005026 calypso mRNA 36794 Prediction 0.1828