| DNA & RNA Element - microRNA |
| Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
| MIMAT0005499 | dme-miR-983 | 41880 | CG31302 | aguaAUCAAGCUUUGCAUAAUa | ||| |: |: | ||||| | uucgUAGAUU-AGUCUUAUUAu | 2 | 19 | 33 | 53 | [dm3:3R:11225650-11225670:+] | 0.7589 | 120 | 0 | -5.00 | -0.1134 |
| MIMAT0011786 | dme-miR-2280 | 41880 | CG31302 | uauaaaaUAACGGUUCGAUUcu | ||| |:||||||| | gauuacgAUUACUAAGCUAAua | 3 | 16 | 82 | 103 | [dm3:3R:11225699-11225720:+] | 0.6051 | 143 | 0 | -10.18 | -0.3357 |
| MIMAT0011787 | dme-miR-2280* | 41880 | CG31302 | agUCAAUCGAACCUUCAUUUaa | || || : | ||||||| | uaAGCUAAUAU-AAAGUAAAac | 3 | 21 | 94 | 114 | [dm3:3R:11225711-11225731:+] | 0.6051 | 130 | 0 | -7.00 | -0.1020 |
| MIMAT0012199 | dme-miR-2492 | 41880 | CG31302 | aaacuuucgagagcUGUUUUGUa | ::|||||| | uaagcuaauauaaaGUAAAACAc | 2 | 10 | 94 | 116 | [dm3:3R:11225711-11225733:+] | 0.6051 | 125 | 6 | -8.16 | -0.2624 |
| MIMAT0005486 | dme-miR-970 | 41880 | CG31302 | uaucggcgcacaCAGAAUAcu | ||||||| | auucguagauuaGUCUUAUua | 3 | 10 | 32 | 52 | [dm3:3R:11225649-11225669:+] | 0.7589 | 125 | 0 | -8.84 | -0.6452 |
| MIMAT0005501 | dme-miR-927 | 41880 | CG31302 | ccauuucgcauccuUAAGAUuu | |||||| | ------ccccggucAUUCUAua | 3 | 9 | 1 | 16 | [dm3:3R:11225618-11225633:+] | 0.7898 | 120 | 0 | -5.30 | -0.1863 |
| MIMAT0005504 | dme-miR-987 | 41880 | CG31302 | guAGUUAGGUCUGAUAAAUGAAAu | |:|:||: |:|| ||||| | | gaUUAGUCU-UAUUA-UUACUAUu | 2 | 23 | 39 | 60 | [dm3:3R:11225656-11225677:+] | 0.7281 | 126 | 0 | -10.56 | -0.1704 |