DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 38376 BtbVII auaguaaagUAUACGUUGCAUUUAUGu || | |:|: || |||| guagugcagAUCUUCGAUAUACAUACa 2 19 347 373 [dm3:3L:3154099-3154125:+] 0.5836 126 0 -9.38 -0.1382 MIMAT0000364 dme-miR-289 38376 BtbVII ucagcguccgaggugaauuUAUAAAu |||||| aaccaauauauauguauauAUAUUUa 2 8 1246 1271 [dm3:3L:3154779-3154804:+] 0.5461 120 6 -7.89 -0.1395 MIMAT0000388 dme-miR-303 38376 BtbVII ugGUCAAAGGACACUUUGGAUUu :| |||| | :||||||| aaUACUUUC--AUAGAACCUAAu 2 22 489 509 [dm3:3L:3154022-3154042:+] 0.5836 150 7 -10.47 -0.6630 MIMAT0000388 dme-miR-303 38376 BtbVII ugGUCAAAGGACACUUUGGAUUu :| |||| | :||||||| aaUACUUUC--AUAGAACCUAAu 2 22 270 290 [dm3:3L:3154022-3154042:+] 0.5836 150 7 -10.47 -0.8494 MIMAT0005464 dme-miR-iab-4as-3p 38376 BtbVII auUUGCAUAUGACUUACAUAgg ||| ||| | |||||| ccAACCAAUA-UAUAUGUAUau 3 21 1244 1264 [dm3:3L:3154777-3154797:+] 0.5461 134 0 -6.34 -0.1640 MIMAT0005488 dme-miR-972 38376 BtbVII cggaUUUAUAAGCA-UAACAUGu :|||| | || ||||||| aaaaGAAUAAU-GUAAUUGUACa 2 19 633 654 [dm3:3L:3154166-3154187:+] 0.5610 155 7 -12.36 -1.2887 MIMAT0005488 dme-miR-972 38376 BtbVII cggaUUUAUAAGCA-UAACAUGu :|||| | || ||||||| aaaaGAAUAAU-GUAAUUGUACa 2 19 414 435 [dm3:3L:3154166-3154187:+] 0.5610 155 7 -12.36 -1.3256 MIMAT0005489 dme-miR-973 38376 BtbVII uuuUAGCUUCAAGUUG---GUGGUUGGu || | | | ||: :||||||| gauAUGUAUGAUAAAUAUGUACCAACCa 2 23 1223 1250 [dm3:3L:3154756-3154783:+] 0.5461 145 7 -16.54 -1.2107 MIMAT0005510 dme-miR-992 38376 BtbVII gaAUCAUGGUCU-UUGCACAUga || :|:| | ||||||| uaUAUAGCUAUAUUACGUGUAaa 3 21 613 635 [dm3:3L:3154146-3154168:+] 0.5836 131 0 -11.94 -0.1642 MIMAT0005510 dme-miR-992 38376 BtbVII gaAUCAUGGUCU-UUGCACAUga || :|:| | ||||||| uaUAUAGCUAUAUUACGUGUAaa 3 21 394 416 [dm3:3L:3154146-3154168:+] 0.5836 131 0 -11.94 -0.2425 MIMAT0011784 dme-miR-2279* 38376 BtbVII uuaAAGUGUGUGUCUAUAAAUu | :|:::|:| ||||||| auaUAUAUGUAUAUAUAUUUAu 2 20 1251 1272 [dm3:3L:3154784-3154805:+] 0.5461 159 7 -8.58 -1.1178 MIMAT0011784 dme-miR-2279* 38376 BtbVII uuaaaGUGUGUGU-CUAUAAAUu |::: :|| ||||||| cucccCGUGAGCAUUAUAUUUAg 2 18 1005 1027 [dm3:3L:3154538-3154560:+] 0.4925 144 7 -7.25 -0.2576 MIMAT0011786 dme-miR-2280 38376 BtbVII uaUAAAAUAACGGUUCG-AUUCu | | |||| | |||| |||| ccACUCUAUU-CGAAGCAUAAGg 2 21 1073 1094 [dm3:3L:3154606-3154627:+] 0.4692 126 0 -10.28 -0.4597 MIMAT0011789 dme-miR-2281 38376 BtbVII cguUAUGACGUCUAUG-UCUAu | ||| |||||| |||| aauAGACU-AAGAUACUAGAUc 2 19 1171 1191 [dm3:3L:3154704-3154724:+] 0.5461 124 0 -11.81 -0.2424 MIMAT0000334 dme-miR-92a 38376 BtbVII uauccgGCCCUGUUCA-CGUUAc ||| || ||| ||||| cuuguaCGGCAC-AGUGGCAAUa 2 17 299 320 [dm3:3L:3153832-3153853:+] 0.4956 122 0 -15.13 -0.2644 MIMAT0000334 dme-miR-92a 38376 BtbVII uauccgGCCCUGUUCA-CGUUAc ||| || ||| ||||| cuuguaCGGCAC-AGUGGCAAUa 2 17 80 101 [dm3:3L:3153832-3153853:+] 0.4956 122 0 -15.13 -0.4006 MIMAT0000337 dme-miR-276a 38376 BtbVII ucUCGUGCCAUACUUC-AAGGAu ||||: ||| || ||||| ugAGCAUUAUAUUUAGCUUCCUa 2 21 1012 1034 [dm3:3L:3154545-3154567:+] 0.4925 128 0 -18.07 -0.9538 MIMAT0000347 dme-miR-283 38376 BtbVII ucuuaauggucgacUAUAAAu |||||| auauauauguauauAUAUUUa 2 8 1251 1271 [dm3:3L:3154784-3154804:+] 0.5461 120 6 -4.79 -0.1395 MIMAT0000354 dme-miR-276b 38376 BtbVII ucUCGUGCCAUAAUUC-AAGGAu ||||: |||| || ||||| ugAGCAUUAUAUUUAGCUUCCUa 2 21 1012 1034 [dm3:3L:3154545-3154567:+] 0.4925 136 0 -19.17 -0.9538 MIMAT0000356 dme-miR-285 38376 BtbVII cgugacuaaagcUUACCACGAu |:||||||| cugcagcuaaaaAGUGGUGCUg 2 11 710 731 [dm3:3L:3154243-3154264:+] 0.5384 146 7 -16.47 -0.1105 MIMAT0000358 dme-miR-92b 38376 BtbVII cguccgGCCCUGAUCA-CGUUAa ||| || ||| ||||| cuuguaCGGCAC-AGUGGCAAUa 2 17 299 320 [dm3:3L:3153832-3153853:+] 0.4956 122 0 -14.21 -0.2644 MIMAT0000358 dme-miR-92b 38376 BtbVII cguccgGCCCUGAUCA-CGUUAa ||| || ||| ||||| cuuguaCGGCAC-AGUGGCAAUa 2 17 80 101 [dm3:3L:3153832-3153853:+] 0.4956 122 0 -14.21 -0.4006 MIMAT0000390 dme-miR-304 38376 BtbVII gagUGUAA---AUGUUUAACUCUAAu ||||| ||||| ||||||| uaaACAUUAAGGACAAAAUGAGAUUu 2 21 839 864 [dm3:3L:3154372-3154397:+] 0.4888 167 7 -16.45 -0.8978 MIMAT0000408 dme-miR-316 38376 BtbVII gcgGUCAUUCGCCUUUUUCUgu :| || |: | |||||| cuaUAUUACGU-GUAAAAGAau 3 20 401 421 [dm3:3L:3154153-3154173:+] 0.5610 129 0 -7.74 -0.1429 MIMAT0005466 dme-miR-955 38376 BtbVII cuGUGAGU-UUGGAGACGU-GCUAc || | : ||: | |||| |||| caCAGUGGCAAUAUAUGCAGCGAUa 2 22 308 332 [dm3:3L:3153841-3153865:+] 0.4956 120 0 -11.02 -0.5217 MIMAT0005466 dme-miR-955 38376 BtbVII cuGUGAGU-UUGGAGACGU-GCUAc || | : ||: | |||| |||| caCAGUGGCAAUAUAUGCAGCGAUa 2 22 89 113 [dm3:3L:3153841-3153865:+] 0.4956 120 0 -11.02 -0.7057 MIMAT0005467 dme-miR-190 38376 BtbVII guUGGUUCUUAUA-GUUUGUAUAga |:| :|||| || |||||| agAUCUUCGAUAUACAUACAUAUau 3 23 573 597 [dm3:3L:3154106-3154130:+] 0.5836 141 0 -10.77 -0.1252 MIMAT0005467 dme-miR-190 38376 BtbVII guUGGUUCUUAUA-GUUUGUAUAga |:| :|||| || |||||| agAUCUUCGAUAUACAUACAUAUau 3 23 354 378 [dm3:3L:3154106-3154130:+] 0.5836 141 0 -10.77 -0.2066 MIMAT0005504 dme-miR-987 38376 BtbVII guaguuaggucugauaaAUGAAAu |||||| ggccgcacuuguaauaaUACUUUc 2 8 255 278 [dm3:3L:3154007-3154030:+] 0.5836 120 6 -8.45 -0.1139 MIMAT0005507 dme-miR-137 38376 BtbVII gaugcACA-UAAG--AGUUCGUUAu ||| || | |||||||| cuuuuUGUAAUGCAAGCAAGCAAUg 2 18 779 803 [dm3:3L:3154312-3154336:+] 0.5136 147 7 -13.08 -0.1408 MIMAT0005514 dme-miR-995 38376 BtbVII uuCGGCUUAGUACACCACGAu ||: || | |||||||| caGCUAAA--AAGUGGUGCUg 2 20 713 731 [dm3:3L:3154246-3154264:+] 0.5384 152 7 -18.50 -0.1083 MIMAT0005518 dme-miR-998 38376 BtbVII cucGACUUAGAGU----ACCACGAu ||| | || | ||||||| caaCUGCAGCUAAAAAGUGGUGCUg 2 19 707 731 [dm3:3L:3154240-3154264:+] 0.5384 145 7 -19.60 -0.1083 MIMAT0005016 dme-miR-1003 38376 BtbVII gacacuuauACAUUUACACUCu | | |||||||| uuagcuuccUAUCAAUGUGAGa 2 14 1024 1045 [dm3:3L:3154557-3154578:+] 0.4925 149 7 -12.05 -0.7431 MIMAT0005017 dme-miR-1004 38376 BtbVII gacacucccuucacUACACUCu ||||||| uuagcuuccuaucaAUGUGAGa 2 9 1024 1045 [dm3:3L:3154557-3154578:+] 0.4925 140 7 -11.21 -0.7579 MIMAT0005020 dme-miR-1007 38376 BtbVII acgUUUG-UCAAUUAACUCGAau || | | || ||||||| uagAACCUAAUUCCUUGAGCUaa 3 20 280 302 [dm3:3L:3154032-3154054:+] 0.5836 134 0 -7.73 -0.1004 MIMAT0005024 dme-miR-1011 38376 BtbVII gacgcucgcuaaacUUGGUUAUu |||||||| gauaaauauguaccAACCAAUAu 2 10 1232 1254 [dm3:3L:3154765-3154787:+] 0.5461 145 7 -8.27 -0.7814 MIMAT0005027 dme-miR-1014 38376 BtbVII gacgUUUACUUUUACU-UAAAa |:: ||||||| |||| auuaAGGACAAAAUGAGAUUUa 2 18 844 865 [dm3:3L:3154377-3154398:+] 0.4888 125 0 -8.66 -0.9616

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G123168 BtbVII Drosophila melanogaster 38376

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score BtbVII RAID00015147 dme-miR-318-3p miRNA MIMAT0000410 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID00273459 dme-miR-998-3p miRNA MIMAT0005518 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID00564334 dme-miR-282-5p miRNA MIMAT0000346 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID00749108 dme-miR-989-3p miRNA MIMAT0005506 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID00749455 dme-miR-1010-3p miRNA MIMAT0005023 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID00781015 dme-miR-1002-5p miRNA MIMAT0005483 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID00852249 dme-miR-283-5p miRNA MIMAT0000347 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID00941241 dme-miR-276a-3p miRNA MIMAT0000337 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID00997458 dme-miR-995-3p miRNA MIMAT0005514 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID01048519 dme-miR-1011-3p miRNA MIMAT0005024 BtbVII mRNA 38376 Prediction 0.2381 BtbVII RAID01114239 dme-miR-1003-3p miRNA MIMAT0005016 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID01120755 dme-miR-960-5p miRNA MIMAT0005474 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01140689 dme-miR-990-5p miRNA MIMAT0005508 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01203978 dme-miR-279-3p miRNA MIMAT0000341 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01277072 dme-miR-996-3p miRNA MIMAT0005515 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01417718 dme-miR-1004-3p miRNA MIMAT0005017 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID01461899 dme-miR-92b-3p miRNA MIMAT0000358 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01725252 dme-miR-33-5p miRNA MIMAT0000342 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01726161 dme-miR-1007-3p miRNA MIMAT0005020 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01750117 dme-miR-992-3p miRNA MIMAT0005510 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01795597 dme-miR-92a-3p miRNA MIMAT0000334 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID01855553 dme-miR-1014-3p miRNA MIMAT0005027 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID01947504 dme-miR-1006-3p miRNA MIMAT0005019 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID02115425 dme-miR-1015-3p miRNA MIMAT0005028 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID02295674 dme-miR-1009-3p miRNA MIMAT0005022 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID02663225 dme-miR-285-3p miRNA MIMAT0000356 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID02717654 dme-miR-955-5p miRNA MIMAT0005466 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID02767580 dme-miR-137-3p miRNA MIMAT0005507 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID02828789 dme-miR-190-5p miRNA MIMAT0005467 BtbVII mRNA 38376 Prediction 0.2381 BtbVII RAID02915354 dme-miR-304-5p miRNA MIMAT0000390 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID03128265 dme-miR-10-3p miRNA MIMAT0012531 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03187289 dme-miR-315-5p miRNA MIMAT0000407 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03199185 dme-miR-305-5p miRNA MIMAT0000391 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID03359558 dme-miR-973-5p miRNA MIMAT0005489 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03484147 dme-miR-314-3p miRNA MIMAT0000406 BtbVII mRNA 38376 Prediction 0.2202 BtbVII RAID03487544 dme-miR-316-5p miRNA MIMAT0000408 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03505347 dme-miR-980-3p miRNA MIMAT0005496 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03556684 dme-miR-276b-3p miRNA MIMAT0000354 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03633267 dme-miR-972-3p miRNA MIMAT0005488 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03710363 dme-miR-987-5p miRNA MIMAT0005504 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03851158 dme-miR-286-3p miRNA MIMAT0000359 BtbVII mRNA 38376 Prediction 0.1828 BtbVII RAID03897079 dme-miR-252-5p miRNA MIMAT0005516 BtbVII mRNA 38376 Prediction 0.1828