DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 37795 CG5591 ucagcguccgaggUGAAUUUAUAAAu | | ||||||| uugaaauaaagaaAAUGCAAUAUUUa 2 14 21 46 [dm3:2R:19791155-19791180:+] 0.5441 141 7 -7.20 -1.1563 MIMAT0011784 dme-miR-2279* 37795 CG5591 uuaaagUGUGUGUCUAUAAAUu | |::|| ||||||| uaaagaAAAUGCA-AUAUUUAa 2 17 27 47 [dm3:2R:19791161-19791181:+] 0.5441 150 7 -5.64 -1.2935 MIMAT0011791 dme-miR-2283 37795 CG5591 uaacagcaUAAGUACUAUAAAag || || |||||| uaaagaaaAUGCA--AUAUUUaa 3 16 27 47 [dm3:2R:19791161-19791181:+] 0.5441 124 0 -1.36 -0.3252 MIMAT0012196 dme-miR-2489 37795 CG5591 ugACGUU-UAUGUUGUAUGUUAu || || | | || ||:|||| auUGAAAUAAAGAAAAUGCAAUa 2 21 20 42 [dm3:2R:19791154-19791176:+] 0.5441 143 0 -12.01 -0.3076 MIMAT0000334 dme-miR-92a 37795 CG5591 uauccggcccuguucACGUUAc |||||| uugaaauaaagaaaaUGCAAUa 2 8 21 42 [dm3:2R:19791155-19791176:+] 0.5441 120 6 -4.78 -0.7355 MIMAT0000347 dme-miR-283 37795 CG5591 ucuuaauggucgacUAUAAAu |||||| auaaagaaaaugcaAUAUUUa 2 8 26 46 [dm3:2R:19791160-19791180:+] 0.5441 120 6 -5.29 -0.2406 MIMAT0000358 dme-miR-92b 37795 CG5591 cguccggcccugaucACGUUAa |||||| uugaaauaaagaaaaUGCAAUa 2 8 21 42 [dm3:2R:19791155-19791176:+] 0.5441 120 6 -5.02 -0.7355 MIMAT0000402 dme-miR-310 37795 CG5591 uuuccggcccuucacACGUUAu |||||| uugaaauaaagaaaaUGCAAUa 2 8 21 42 [dm3:2R:19791155-19791176:+] 0.5441 120 6 -7.66 -0.7355 MIMAT0000403 dme-miR-311 37795 CG5591 aguccggccacuuacACGUUAu |||||| uugaaauaaagaaaaUGCAAUa 2 8 21 42 [dm3:2R:19791155-19791176:+] 0.5441 120 6 -8.84 -0.7392 MIMAT0000404 dme-miR-312 37795 CG5591 aguccggcagaguucACGUUAu |||||| uugaaauaaagaaaaUGCAAUa 2 8 21 42 [dm3:2R:19791155-19791176:+] 0.5441 120 6 -7.07 -0.7392 MIMAT0000405 dme-miR-313 37795 CG5591 agcccgacacUUUUCACGUUAu :||| |||||| uugaaauaaaGAAAAUGCAAUa 2 13 21 42 [dm3:2R:19791155-19791176:+] 0.5441 124 6 -11.13 -0.7355

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Lpt RAID00026624 dme-miR-310-3p miRNA MIMAT0000402 Lpt mRNA 37795 Prediction 0.2202 Lpt RAID00573388 dme-miR-33-5p miRNA MIMAT0000342 Lpt mRNA 37795 Prediction 0.1828 Lpt RAID01059321 dme-miR-92b-3p miRNA MIMAT0000358 Lpt mRNA 37795 Prediction 0.2202 Lpt RAID01519969 dme-miR-283-5p miRNA MIMAT0000347 Lpt mRNA 37795 Prediction 0.1828 Lpt RAID02000449 dme-miR-124-3p miRNA MIMAT0000351 Lpt mRNA 37795 Prediction 0.1828 Lpt RAID02824087 dme-miR-313-3p miRNA MIMAT0000405 Lpt mRNA 37795 Prediction 0.2202 Lpt RAID03213532 dme-miR-312-3p miRNA MIMAT0000404 Lpt mRNA 37795 Prediction 0.2202 Lpt RAID03623309 dme-miR-311-3p miRNA MIMAT0000403 Lpt mRNA 37795 Prediction 0.2202 Lpt RAID04056251 dme-miR-92a-3p miRNA MIMAT0000334 Lpt mRNA 37795 Prediction 0.2202