DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 35524 Src42A auAGUAAAGUAUACG-UUGCAUUUAUGu ||| || |||| | ||: ||||||| gaUCACUU-AUAUACAAAUAUAAAUACa 2 26 432 458 [dm3:2R:1899548-1899574:+] 0.5242 174 7 -15.64 -1.1607 MIMAT0000343 dme-miR-280 35524 Src42A auaGUAAAGUAUACGUU--GCAUUUAUGu :||||| | | :|| : ||||||: aaaUAUUUC-UUUAUAAUUUAUAAAUAUa 2 25 853 880 [dm3:2R:1899969-1899996:+] 0.6331 141 0 -9.23 -0.7049 MIMAT0000360 dme-miR-287 35524 Src42A cacguuugcuaaaaGUUGUGu |||||| acaaauagaaaaagCAACACa 2 8 670 690 [dm3:2R:1899786-1899806:+] 0.5242 120 6 -14.79 -0.1161 MIMAT0000364 dme-miR-289 35524 Src42A ucagcguccgaGGUGAAUUUAUAAAu ||| |||||||| uacauuuagaaCCAAGAAAAUAUUUc 2 16 836 861 [dm3:2R:1899952-1899977:+] 0.6331 151 7 -8.48 -1.2300 MIMAT0005464 dme-miR-iab-4as-3p 35524 Src42A auuugcAUAUGACUUACAUAGg ||||: |||||||: gauuaaUAUAUCAAAUGUAUUa 2 17 352 373 [dm3:2R:1899468-1899489:+] 0.4810 144 0 -8.73 -0.1757 MIMAT0005475 dme-miR-961 35524 Src42A uaGAGUCAAUGACCACUAGUuu | :| ||: |||||| caCAUAUAUAUAUAUGAUCAcu 3 21 417 438 [dm3:2R:1899533-1899554:+] 0.5242 124 0 -5.33 -0.1687 MIMAT0005499 dme-miR-983 35524 Src42A agUAAUCA-A-GCUUUGCAUAAUa |||| | | : |||:|||||| cgAUUAAUAUAUCAAAUGUAUUAu 2 21 351 374 [dm3:2R:1899467-1899490:+] 0.4810 146 6 -10.78 -0.1321 MIMAT0005502 dme-miR-985 35524 Src42A acgggcUGGUAACCUUGUAAAc |||| ||:|||| uuuagaACCAAGAAAAUAUUUc 2 17 840 861 [dm3:2R:1899956-1899977:+] 0.6331 132 0 -6.43 -0.1134 MIMAT0005502 dme-miR-985 35524 Src42A acgggcugguaaccuUGUAAAc |||||| uauacgaaaacauguACAUUUa 2 8 822 843 [dm3:2R:1899938-1899959:+] 0.6331 120 6 -10.64 -0.1669 MIMAT0005510 dme-miR-992 35524 Src42A gaAUCAUGGUCUUUGCACAUGa || ||| | |||| ||||| caUA-UACGA-AAACAUGUACa 2 21 820 839 [dm3:2R:1899936-1899955:+] 0.6331 132 0 -9.83 -0.1222 MIMAT0005026 dme-miR-1013 35524 Src42A gcucaagccguaUGAAAAUa ||||||| caaaaauuuuucACUUUUAg 2 9 581 600 [dm3:2R:1899697-1899716:+] 0.5242 140 7 -4.99 -0.8976 MIMAT0011784 dme-miR-2279* 35524 Src42A uuaaaGUGUGU-GUCUAUAAAUu ||:|:| || ||||||| uaacgCAUAUAGCAUAUAUUUAc 2 18 383 405 [dm3:2R:1899499-1899521:+] 0.5026 160 7 -14.45 -0.7364 MIMAT0011784 dme-miR-2279* 35524 Src42A uuaaaguGUGUGUCUAUAAAuu || : | |||||| uuagaacCAAGAAAAUAUUUcu 3 16 841 862 [dm3:2R:1899957-1899978:+] 0.6331 127 0 -1.96 -0.3322 MIMAT0011784 dme-miR-2279* 35524 Src42A uuaAAGUGUGU--GUCUAUAAAUu | ||:|:| :| |||||| aaaUCCAUAUAAUUACUUAUUUAg 2 20 747 770 [dm3:2R:1899863-1899886:+] 0.5242 122 6 -8.33 -0.1319 MIMAT0011791 dme-miR-2283 35524 Src42A uaacagcAU-AAGUACUAUAAAAg || ||| | ||| ||| aagaaaaUAUUUCUUUAUAAUUUa 2 17 849 872 [dm3:2R:1899965-1899988:+] 0.6331 123 0 -1.62 -0.2041 MIMAT0011791 dme-miR-2283 35524 Src42A uaacagcauaaguacUAUAAAag |||||| uuuagaaccaagaaaAUAUUUcu 3 9 840 862 [dm3:2R:1899956-1899978:+] 0.6331 120 0 -1.48 -0.3405 MIMAT0012196 dme-miR-2489 35524 Src42A ugACGUU-UAUGU-UGUAUGUUau ||||: | ||| |:|||||| uuUGCAGCACACACAUAUACAAaa 3 21 562 585 [dm3:2R:1899678-1899701:+] 0.5242 146 0 -14.11 -0.1792 MIMAT0012196 dme-miR-2489 35524 Src42A ugACGUUUAUG-UUGUAUGU-UAu |||| | || |||||||| || uaUGCAUAAACAAACAUACAUAUa 2 21 802 825 [dm3:2R:1899918-1899941:+] 0.5786 139 0 -14.80 -1.0859 MIMAT0012201 dme-miR-2493 35524 Src42A ugcgGAGCGUGUUUAUGUGUGcc :|: |:|: |||||||| uauaUUUACGCGUAUACACACac 3 20 397 419 [dm3:2R:1899513-1899535:+] 0.5242 143 0 -17.78 -0.1756 MIMAT0012209 dme-miR-2497 35524 Src42A gaCGUUUGUAACAUUUA-CAACa ||| :| |||||| |||| uaGCAUUUAAGGUAAAUAGUUGc 2 21 210 232 [dm3:2R:1899326-1899348:+] 0.4810 128 0 -14.40 -0.5148 MIMAT0012214 dme-miR-2500* 35524 Src42A ccAUAACAUAUACACA---CAAGGAAUg || | |||| | | |||:||| uaUAAUUUAUAAAUAUAAAAUUCUUUAa 2 24 864 891 [dm3:2R:1899980-1900007:+] 0.4783 134 0 -4.89 -0.1135 MIMAT0012214 dme-miR-2500* 35524 Src42A ccauaacauauacacacAAGGAAUg |||:||| uagaaccaagaaaauauUUCUUUAu 2 9 842 866 [dm3:2R:1899958-1899982:+] 0.6331 124 0 -4.58 -0.1170 MIMAT0012531 dme-miR-10-3p 35524 Src42A uuuggagagaucuuggCUUAAAc |||||| uauaauuacuuauuuaGAAUUUa 2 8 754 776 [dm3:2R:1899870-1899892:+] 0.5242 120 6 -8.87 -0.3417 MIMAT0000319 dme-miR-263a 35524 Src42A cacuuaagaaggucacGGUAAUUg :|||||| gcaacacaaacgccaaUCAUUAAa 2 9 683 706 [dm3:2R:1899799-1899822:+] 0.5242 124 6 -9.00 -0.1063 MIMAT0000332 dme-miR-274 35524 Src42A uaauggGCAAU-CAC-AGCCAGUGUUUu | ||| || |: ||||||| caacgaCAUUAUAUGCUUUAUCACAAAu 2 21 648 675 [dm3:2R:1899764-1899791:+] 0.5242 146 7 -10.21 -1.1175 MIMAT0000347 dme-miR-283 35524 Src42A ucuuaauggucgaCUAUAAAu ||||||| ccaaccugagaacGAUAUUUg 2 9 545 565 [dm3:2R:1899661-1899681:+] 0.5242 140 7 -9.89 -0.2183 MIMAT0000347 dme-miR-283 35524 Src42A ucuuaauggucgacUAUAAAu |||||| uuagaaccaagaaaAUAUUUc 2 8 841 861 [dm3:2R:1899957-1899977:+] 0.6331 120 6 -7.14 -0.3698 MIMAT0000348 dme-miR-284 35524 Src42A guuaaCGACCUUA-GUUCAA--CGACUG-AAGu | |||||| ||| || |||| ||| gcugaGGUGGAAUGCAAUUUCAAAUGACGUUCc 2 25 231 263 [dm3:2R:1899347-1899379:+] 0.4810 130 0 -16.66 -0.5976 MIMAT0000407 dme-miR-315 35524 Src42A cgAAAGACUCGUUGU-UAGUUUu |||| || :||:| |||||| uaUUUC-GAUUAAUAUAUCAAAu 2 21 346 367 [dm3:2R:1899462-1899483:+] 0.4810 134 6 -10.92 -0.9662 MIMAT0000412 dme-miR-iab-4-5p 35524 Src42A aguccUAUGUAAGUCAUAUGCa | |||| | |||||| uaaacAAACAUAC-AUAUACGa 2 18 808 828 [dm3:2R:1899924-1899944:+] 0.6331 123 6 -11.24 -0.2468 MIMAT0005463 dme-miR-iab-4as-5p 35524 Src42A gccaUAUGGAAGUCAUAUGCAUu | || | || |||||| | aaacAAACAUACA-UAUACGAAa 2 20 809 830 [dm3:2R:1899925-1899946:+] 0.6331 125 0 -9.18 -0.1042 MIMAT0005476 dme-miR-962 35524 Src42A cugucgUA-GUUAAAGAGAUGGAAUa || :||||| | |||||| auuuaaAUGUAAUUUGU-AACCUUAa 2 20 772 796 [dm3:2R:1899888-1899912:+] 0.5242 128 6 -9.85 -0.1384 MIMAT0005480 dme-miR-965 35524 Src42A uucCCCUUUUCGAUAUGCGAAu || ::| :||||||||| cuuGGUCGGAUUUAUACGCUUu 2 20 309 330 [dm3:2R:1899425-1899446:+] 0.4810 159 7 -16.23 -0.5890 MIMAT0005483 dme-miR-1002 35524 Src42A agcgggaaacAUAGGUGAUGAAUu ||| |:|||||| gcuaaauccaUAU-AAUUACUUAu 2 15 744 766 [dm3:2R:1899860-1899882:+] 0.5242 132 6 -10.03 -0.1811 MIMAT0005485 dme-miR-969 35524 Src42A uuuUGAACGAAUCACCU-UGAg :|| || || |||| ||| uauGCUAGC-UACUGGAUACUu 2 19 709 729 [dm3:2R:1899825-1899845:+] 0.5242 120 0 -10.98 -0.5336 MIMAT0005492 dme-miR-976 35524 Src42A cguaacuacUAUUGA-UUAGGUu |||:|| |||||| cagugcccaAUAGCUAAAUCCAu 2 14 732 754 [dm3:2R:1899848-1899870:+] 0.5242 125 6 -11.58 -1.0586 MIMAT0005497 dme-miR-981 35524 Src42A acguccaaagcagcuGUUGCUu |||||| cucacugaacauuauCAACGAc 2 8 633 654 [dm3:2R:1899749-1899770:+] 0.5242 120 6 -6.85 -0.1412 MIMAT0005504 dme-miR-987 35524 Src42A guaGUUAGGUCUGA-UAAAUGAAAu ||||:| ||| | ||||||| ggaCAAUUCUUACUAAGUUACUUUu 2 22 86 110 [dm3:2R:1899202-1899226:+] 0.4986 168 7 -17.44 -0.5683 MIMAT0005504 dme-miR-987 35524 Src42A guAGUUAGGUCUGAUAAAUGAAau | |||||| | || |||||| gcUAAAUCCAUA-UAAUUACUUau 3 23 744 766 [dm3:2R:1899860-1899882:+] 0.5242 152 0 -11.14 -0.1480 MIMAT0005504 dme-miR-987 35524 Src42A guagUUAGGUCUGAUA-AAUGAAAu || | ||| || || |||| uuagAACCAAGAAAAUAUUUCUUUa 2 21 841 865 [dm3:2R:1899957-1899981:+] 0.6331 127 0 -12.07 -0.2344 MIMAT0005513 dme-miR-994 35524 Src42A uagugccgaUGAUAAAGGAAUc | ||||||:||| aaccaagaaAAUAUUUCUUUAu 2 14 845 866 [dm3:2R:1899961-1899982:+] 0.6331 141 0 -8.41 -0.1194 MIMAT0005513 dme-miR-994 35524 Src42A uagugccgaugaUAAAGGAAUc | |||:||| uuauaaauauaaAAUUCUUUAa 2 11 870 891 [dm3:2R:1899986-1900007:+] 0.4783 126 0 -3.42 -0.1170 MIMAT0005516 dme-miR-252 35524 Src42A gaggacgccgugaucAUGAAUc |||||| cuaaauccauauaauUACUUAu 2 8 745 766 [dm3:2R:1899861-1899882:+] 0.5242 120 6 -4.01 -0.1863 MIMAT0005519 dme-miR-999 35524 Src42A ucugugucaGAAUGUCAAUUGu ||| :||||||: aauuuuucaCUUUUAGUUAAUu 2 14 585 606 [dm3:2R:1899701-1899722:+] 0.5242 137 0 -9.90 -0.1152 MIMAT0005019 dme-miR-1006 35524 Src42A gauacuuauucuuuagCUUAAAu |||||| uauaauuacuuauuuaGAAUUUa 2 8 754 776 [dm3:2R:1899870-1899892:+] 0.5242 120 6 -4.62 -0.3390 MIMAT0005024 dme-miR-1011 35524 Src42A gacgcucgcUAAA-CUUGGUUAUu |||| ||||||| | aacauguacAUUUAGAACCAAGAa 2 15 830 853 [dm3:2R:1899946-1899969:+] 0.6331 129 0 -10.85 -0.2374 MIMAT0005027 dme-miR-1014 35524 Src42A gacgUUUACUUUUAC-UUAAAa :||| ||||| ||||| uuuaGAAUUUAAAUGUAAUUUg 2 18 766 787 [dm3:2R:1899882-1899903:+] 0.5242 129 0 -5.63 -1.1532 MIMAT0005027 dme-miR-1014 35524 Src42A gacgUUUACUUUUAC-UUAAAa |::|| :|||| ||||| gcugAGGUG-GAAUGCAAUUUc 2 18 231 251 [dm3:2R:1899347-1899367:+] 0.4810 123 0 -12.91 -0.6865

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Src42A RAID00103334 dme-miR-1006-3p miRNA MIMAT0005019 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID00122574 dme-miR-991-3p miRNA MIMAT0005509 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID00123427 dme-miR-274-5p miRNA MIMAT0000332 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID00830637 dme-miR-34-5p miRNA MIMAT0000350 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID00864826 dme-miR-277-3p miRNA MIMAT0000338 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID00986266 dme-miR-190-5p miRNA MIMAT0005467 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01076783 dme-miR-3-3p miRNA MIMAT0000108 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01245181 dme-mir-iab-4 miRNA MI0000432 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01254391 dme-miR-10-3p miRNA MIMAT0012531 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01345956 dme-miR-315-5p miRNA MIMAT0000407 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID01397397 dme-miR-959-3p miRNA MIMAT0005473 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01620867 dme-miR-997-5p miRNA MIMAT0005517 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01849551 dme-miR-263a-5p miRNA MIMAT0000319 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01857875 dme-miR-985-3p miRNA MIMAT0005502 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01874241 dme-miR-987-5p miRNA MIMAT0005504 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID01922586 dme-miR-981-3p miRNA MIMAT0005497 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID01956593 dme-miR-14-3p miRNA MIMAT0000120 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02042992 dme-miR-932-5p miRNA MIMAT0005479 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02058648 dme-miR-252-5p miRNA MIMAT0005516 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02072654 dme-miR-2c-3p miRNA MIMAT0000411 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02080634 dme-miR-309-3p miRNA MIMAT0000401 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02087972 dme-miR-1-3p miRNA MIMAT0000105 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02204239 dme-miR-969-5p miRNA MIMAT0005485 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02234156 dme-miR-318-3p miRNA MIMAT0000410 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02374543 dme-miR-976-3p miRNA MIMAT0005492 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02391207 dme-miR-994-5p miRNA MIMAT0005513 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02468935 dme-miR-317-3p miRNA MIMAT0000409 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02608704 dme-miR-iab-8-5p miRNA MIMAT0005463 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02657314 dme-miR-iab-4-5p miRNA MIMAT0000412 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02738443 dme-miR-263b-5p miRNA MIMAT0000362 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02740348 dme-miR-999-3p miRNA MIMAT0005519 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID02854715 dme-miR-303-5p miRNA MIMAT0000388 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID03005692 dme-miR-1002-5p miRNA MIMAT0005483 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID03063529 dme-mir-2a-2 miRNA MI0000118 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID03073704 dme-miR-283-5p miRNA MIMAT0000347 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID03210778 dme-miR-1011-3p miRNA MIMAT0005024 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID03238622 dme-miR-965-3p miRNA MIMAT0005480 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID03304474 dme-miR-1003-3p miRNA MIMAT0005016 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID03611018 dme-miR-1004-3p miRNA MIMAT0005017 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID03755709 dme-miR-1013-3p miRNA MIMAT0005026 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID03880868 dme-miR-284-3p miRNA MIMAT0000348 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID03893690 dme-miR-962-5p miRNA MIMAT0005476 Src42A mRNA 35524 Prediction 0.2202 Src42A RAID03949999 dme-miR-33-5p miRNA MIMAT0000342 Src42A mRNA 35524 Prediction 0.1828 Src42A RAID04047394 dme-miR-1014-3p miRNA MIMAT0005027 Src42A mRNA 35524 Prediction 0.1828