DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015114 cel-miR-238* 189194 apt-9 cgaAACUUGCAGGCUCUUGUAGGu | ||| | | | ||||||| gacUAGAAAAUGCUA-AACAUCCc 2 22 74 96 [ce6:X:11071777-11071799:+] 0.5026 151 7 -11.21 -0.8931 MIMAT0000317 cel-miR-262 189194 apt-9 uagucuuuUGUAGCUCUUUg | ||:|||||| ---auuguAAAUUGAGAAAa 2 13 1 17 [ce6:X:11071704-11071720:+] 0.6629 136 6 -9.84 -0.7808 MIMAT0015266 cel-miR-1822* 189194 apt-9 cggcuaucgaaaggguCUCUUUga |||||| ------auuguaaauuGAGAAAaa 3 9 1 18 [ce6:X:11071704-11071721:+] 0.6629 120 0 -5.23 -0.5350 MIMAT0006771 cel-miR-1829c 189194 apt-9 augUUGGUAGAACUUAAAGCGAa || || || |||||:| gagAAAAAUAUU--UUUUCGUUu 2 21 11 31 [ce6:X:11071714-11071734:+] 0.6629 129 0 -8.06 -0.2926 MIMAT0000006 cel-miR-35 189194 apt-9 ugACGAUCAAAGGU-GGGCCAcu ||:| |||::: |||||| uuUGUUUUUUUUUGUCCCGGUuu 3 21 29 51 [ce6:X:11071732-11071754:+] 0.5787 139 0 -16.68 -0.1854 MIMAT0000007 cel-miR-36 189194 apt-9 guACGCUUAAAAGU-GGGCCAcu ||: ||||:: |||||| uuUGUUUUUUUUUGUCCCGGUuu 3 21 29 51 [ce6:X:11071732-11071754:+] 0.5787 135 0 -14.37 -0.1872 MIMAT0000008 cel-miR-37 189194 apt-9 ugACGUUCACAAGU-GGGCCAcu ||: | ||:: |||||| uuUGUUUUUUUUUGUCCCGGUuu 3 21 29 51 [ce6:X:11071732-11071754:+] 0.5787 127 0 -12.89 -0.1872 MIMAT0000009 cel-miR-38 189194 apt-9 ugaggucAAAAAGAGGGCCAcu ||||| ||||||| uuguuuuUUUUUGUCCCGGUuu 3 16 30 51 [ce6:X:11071733-11071754:+] 0.5787 147 0 -16.95 -0.1837 MIMAT0000010 cel-miR-39 189194 apt-9 guuCGACUAAAUGU-GGGCCAcu |:| ||| :: |||||| uuuGUUUUUUUUUGUCCCGGUuu 3 20 29 51 [ce6:X:11071732-11071754:+] 0.5787 130 0 -13.00 -0.1854 MIMAT0000011 cel-miR-40 189194 apt-9 aauCGACUACAUGU-GGGCCAcu |:| | | :: |||||| uuuGUUUUUUUUUGUCCCGGUuu 3 20 29 51 [ce6:X:11071732-11071754:+] 0.5787 122 0 -11.62 -0.1854 MIMAT0000012 cel-miR-41 189194 apt-9 aucCACUAAAAAGU-GGGCCAcu || |||||:: |||||| uuuGUUUUUUUUUGUCCCGGUuu 3 20 29 51 [ce6:X:11071732-11071754:+] 0.5787 142 0 -14.20 -0.1837 MIMAT0000013 cel-miR-42 189194 apt-9 agacaucuACAAUUGGGCCAcu | ||: |||||| uuguuuuuUUUUGUCCCGGUuu 3 15 30 51 [ce6:X:11071733-11071754:+] 0.5787 130 0 -14.18 -0.1872 MIMAT0000302 cel-miR-246 189194 apt-9 cgAGGAUGGGCUUUGUACAUu |: ||: || |||||| gcUUGUAUACGUUUCAUGUAa 2 20 104 124 [ce6:X:11071807-11071827:+] 0.5106 123 6 -16.97 -0.1083

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score apt-9 RAID00636117 cel-miR-35-3p miRNA MIMAT0000006 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID01357901 cel-miR-42-3p miRNA MIMAT0000013 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID02165364 cel-miR-38-3p miRNA MIMAT0000009 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID02175711 cel-miR-41-3p miRNA MIMAT0000012 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID02259871 cel-miR-246-3p miRNA MIMAT0000302 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID02998402 cel-miR-37-3p miRNA MIMAT0000008 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID03040327 cel-miR-40-3p miRNA MIMAT0000011 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID03625651 cel-miR-39-3p miRNA MIMAT0000010 apt-9 mRNA 189194 Prediction 0.1828 apt-9 RAID03850856 cel-miR-36-3p miRNA MIMAT0000007 apt-9 mRNA 189194 Prediction 0.1828