DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015100 cel-miR-58* 176440 cor-1 acUCUACGC-UUCU-CAUCCCGu || |||| || ||||||| ucAGCUGCGUCUGACGUAGGGCa 2 20 51 73 [ce6:III:10253544-10253564,10254331-10254332:+] 0.6333 153 7 -24.14 -0.3757 MIMAT0015109 cel-miR-81* 176440 cor-1 agagucuagugccaCUUUUGGc ||||||: uuaauuuuuugaaaGAAAACUu 2 9 216 237 [ce6:III:10254475-10254496:+] 0.4602 124 0 -6.53 -0.1590 MIMAT0015115 cel-miR-239b* 176440 cor-1 aaAAACGUGUGGUGUUUUCACg ||||: :: :| ||||||| ugUUUGUUUG-UA-AAAAGUGu 2 21 77 96 [ce6:III:10254545-10254564:+] 0.5305 148 7 -10.43 -1.0974 MIMAT0000313 cel-miR-258 176440 cor-1 uuuuccuaaggAGAGUUUUgg |:|||||| gaaaaaaaaaaUUUCAAAAaa 3 11 36 56 [ce6:III:10254504-10254524:+] 0.5305 126 0 -5.65 -0.4781 MIMAT0000313 cel-miR-258 176440 cor-1 uuuuccuaaggAGAGUUUUgg |:|||||| gaaaaaaaaaaUUUCAAAAaa 3 11 245 265 [ce6:III:10254504-10254524:+] 0.5305 126 0 -5.65 -0.5890 MIMAT0000313 cel-miR-258 176440 cor-1 uuuuccuaaggAGAGUUUUgg |:|||||| gaaaaaaaaaaUUUCAAAAaa 3 11 36 56 [ce6:III:10254504-10254524:+] 0.5305 126 0 -5.65 -0.5316 MIMAT0000313 cel-miR-258 176440 cor-1 uuuuccuaaggAGAGUUUUgg |:|||||| gaaaaaaaaaaUUUCAAAAaa 3 11 36 56 [ce6:III:10254504-10254524:+] 0.5305 126 0 -5.65 -0.4833 MIMAT0015241 cel-miR-797* 176440 cor-1 uaAAGUGUCUUUGGUUACUUUu ||:: | :| |::|||||| cuUUUGGAAGAUCUGAUGAAAa 2 21 96 117 [ce6:III:10254355-10254376:+] 0.7181 144 6 -10.47 -0.2774 MIMAT0004233 cel-miR-798 176440 cor-1 agucaGUUAUA--CAUUCCGAAu :||||| | || |||| gaucgUAAUAUGAGCAAUGCUUa 2 17 177 199 [ce6:III:10254436-10254458:+] 0.7740 123 0 -10.31 -0.1024 MIMAT0006769 cel-miR-1829a 176440 cor-1 uuaucucuuuaaggUUACCAac |||||| auugcaaccuaauaAAUGGUaa 3 9 107 128 [ce6:III:10254575-10254596:+] 0.5305 120 0 -5.82 -0.1464 MIMAT0011459 cel-miR-2219* 176440 cor-1 cugCUACAC-GCUCU--CUUUCGACa ||| || :|| | |||||||| gaaGAUCUGAUGAAAAUGAAAGCUGu 2 21 102 127 [ce6:III:10254361-10254386:+] 0.7181 158 7 -17.51 -0.7225 MIMAT0000049 cel-miR-77 176440 cor-1 accugucgaUACCGGACUACUu | | :||||||| agcuuuuggAAGAUCUGAUGAa 2 14 94 115 [ce6:III:10254353-10254374:+] 0.7181 145 7 -18.79 -1.2970 MIMAT0000061 cel-miR-90 176440 cor-1 uccccguAAGUUUGUUGUAUAGu |||||| || ||||| aaaaaauUUCAAAAAAAAUAUCg 2 17 41 63 [ce6:III:10254509-10254531:+] 0.5305 140 0 -10.18 -0.1116 MIMAT0000285 cel-miR-230 176440 cor-1 agAGGAC-CAGCGUGUUGAUUAUg | :|| |:||| | |||||| ugUAUUGUAUUGCA-ACCUAAUAa 2 22 99 121 [ce6:III:10254567-10254589:+] 0.5305 126 6 -11.63 -0.2650 MIMAT0000286 cel-miR-231 176440 cor-1 aaGACGGACAACUAGUGCUCGAAu || | | || || ||||||| acCUCCAUCUUCUUCCCGAGCUUc 2 23 5 28 [ce6:III:10253498-10253521:+] 0.6044 162 7 -13.65 -0.3688 MIMAT0000289 cel-miR-234 176440 cor-1 uuccCAUAAGAGCUCGUUAUu ||| | | |||||||: gaucGUAAUAU-GAGCAAUGc 2 18 177 196 [ce6:III:10254436-10254455:+] 0.7740 139 0 -11.17 -0.2213 MIMAT0000302 cel-miR-246 176440 cor-1 cgAGGAUGGGCUUUGUACAuu |:|| :::| ||||||| uaUUCUUUUUG-AACAUGUuu 3 20 198 217 [ce6:III:10254457-10254476:+] 0.6171 137 0 -14.39 -0.2299 MIMAT0004222 cel-miR-787 176440 cor-1 gcuuucuaugauuuuGCUCGAAu ||||||| ccuccaucuucuuccCGAGCUUc 2 9 6 28 [ce6:III:10253499-10253521:+] 0.6044 140 7 -10.44 -0.3659 MIMAT0004227 cel-miR-792 176440 cor-1 agacuuucaacuucucUAAAGUu |||||| uuuuucgaaaaaaaaaAUUUCAa 2 8 30 52 [ce6:III:10254498-10254520:+] 0.4954 120 6 -5.10 -0.3730 MIMAT0004227 cel-miR-792 176440 cor-1 agacuuucaacuucucUAAAGUu |||||| uuuuucgaaaaaaaaaAUUUCAa 2 8 239 261 [ce6:III:10254498-10254520:+] 0.4954 120 6 -5.10 -0.4210 MIMAT0004227 cel-miR-792 176440 cor-1 agacuuucaacuucucUAAAGUu |||||| uuuuucgaaaaaaaaaAUUUCAa 2 8 30 52 [ce6:III:10254498-10254520:+] 0.4954 120 6 -5.10 -0.5617 MIMAT0004227 cel-miR-792 176440 cor-1 agacuuucaacuucucUAAAGUu |||||| uuuuucgaaaaaaaaaAUUUCAa 2 8 30 52 [ce6:III:10254498-10254520:+] 0.4954 120 6 -5.10 -0.3813

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score cor-1 RAID01349100 cel-miR-77-3p miRNA MIMAT0000049 cor-1 mRNA 176440 Prediction 0.1828 cor-1 RAID01393381 cel-miR-231-3p miRNA MIMAT0000286 cor-1 mRNA 176440 Prediction 0.1828 cor-1 RAID02155967 cel-miR-90-3p miRNA MIMAT0000061 cor-1 mRNA 176440 Prediction 0.1828 cor-1 RAID02248937 cel-miR-230-3p miRNA MIMAT0000285 cor-1 mRNA 176440 Prediction 0.1828 cor-1 RAID02259337 cel-miR-787-3p miRNA MIMAT0004222 cor-1 mRNA 176440 Prediction 0.1828 cor-1 RAID02378551 cel-miR-792-3p miRNA MIMAT0004227 cor-1 mRNA 176440 Prediction 0.1828 cor-1 RAID02396139 cel-miR-246-3p miRNA MIMAT0000302 cor-1 mRNA 176440 Prediction 0.1828 cor-1 RAID02896709 cel-miR-234-3p miRNA MIMAT0000289 cor-1 mRNA 176440 Prediction 0.1828