cpf-1
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0015115cel-miR-239b*174378cpf-1aaaaacguguggUGUUUUCAcg |:|||||| uaaauuauuuaaAUAAAAGUau3116687[ce6:II:8600372-8600393:-]0.59401260-5.39-0.4858
MIMAT0005031cel-miR-1018174378cpf-1gacauucAGG-UUACUAGAGAga ||| ||| |||||| -----ucUCCAAAUAAUCUCUgg316118[ce6:II:8600441-8600458:-]0.59401380-10.86-0.4345
MIMAT0011431cel-miR-2209a*174378cpf-1cuuccucuucucaccAAUGUGAg |||||:| ugaaaauucguuuauUUACAUUu292446[ce6:II:8600413-8600435:-]0.59401240-6.89-0.1274
MIMAT0011433cel-miR-2209c*174378cpf-1uuUGUUCUGCACGCCAAUGUGAg | || ||| : |||||:| ugAAAAUUCGUUUAUUUACAUUu2222446[ce6:II:8600413-8600435:-]0.59401370-8.75-0.1237
MIMAT0011444cel-miR-2214174378cpf-1uugcggccAGUUCAACAACAGUUAc |:| || ||||:||| ucguuuauUUACAUUUUUGUUAAUa2183155[ce6:II:8600404-8600428:-]0.59401410-7.07-0.2534
MIMAT0011449cel-miR-1832b*174378cpf-1uuucacccggcucgcUAAGCGAc |||||:| ucugguuuauugaaaAUUCGUUu291436[ce6:II:8600423-8600445:-]0.59401240-10.10-0.1268
MIMAT0011458cel-miR-2218b*174378cpf-1agaGUGAUGUUUGAUGUUUAAa :|:||: :: |:||||| uaaUAUUAUUGGAAAUAAAUUa2205172[ce6:II:8600387-8600408:-]0.59401350-6.33-0.2171
MIMAT0000291cel-miR-236174378cpf-1ucgcAGU-AAUGGACUGUCAUAAu |:| ||| | | |||||| uaaaUUAUUUAAAUAAAAGUAUUu2206689[ce6:II:8600370-8600393:-]0.59401266-7.52-0.2111
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
cpf-1RAID00244682cel-miR-236-3pmiRNAMIMAT0000291cpf-1mRNA174378Prediction0.1828