DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000313 cel-miR-258 175853 cyk-3 uuuuccuaaggagaGUUUUGg |||||| aucuccauuugcuaCAAAACu 2 8 8 28 [ce6:III:6024374-6024394:+] 0.6169 120 6 -8.47 -0.2035 MIMAT0015240 cel-miR-788* 175853 cyk-3 gcuaagauuAGGUAAAgg ||||||| aaauaaaucUCCAUUUgc 3 10 2 19 [ce6:III:6024368-6024385:+] 0.6169 125 0 -8.14 -0.2799 MIMAT0011438 cel-miR-2211 175853 cyk-3 aaagagGAGAUUUAA----GAUGGACu ||:|||: | ||||||| acaaaaCUUUAAGCUCAAACUACCUGg 2 18 21 47 [ce6:III:6024387-6024413:+] 0.6169 148 7 -17.99 -1.0142 MIMAT0011449 cel-miR-1832b* 175853 cyk-3 uuucACCCGGCU-CGCUAAGCGAc | | ::|| | ||||||| aauaUCGCUUGAUUCUAUUCGCUu 2 20 74 97 [ce6:III:6024440-6024463:+] 0.5279 146 7 -11.44 -0.9955 MIMAT0011449 cel-miR-1832b* 175853 cyk-3 uuucacccggcucGCUAAGCGAc | |||:||| --uaaauaaaucuCCAUUUGCUa 2 11 1 21 [ce6:III:6024367-6024387:+] 0.6169 126 0 -5.67 -0.1024 MIMAT0011456 cel-miR-2218a* 175853 cyk-3 auGUUUGA-UGUGAUAAGACCGGa :||:|| | |||| |||||| uuUAAGCUCAAACUA-CCUGGCCa 2 22 28 50 [ce6:III:6024394-6024416:+] 0.6169 134 6 -19.54 -0.3433 MIMAT0000015 cel-miR-44 175853 cyk-3 ucGACUUACACAGA-GAUCAGu :| ||| | | | |||||| auUUCAAUUUAUGUGCUAGUCa 2 20 140 161 [ce6:III:6024506-6024527:+] 0.4671 123 6 -14.33 -1.0096 MIMAT0000016 cel-miR-45 175853 cyk-3 ucGACUUACACAGA-GAUCAGu :| ||| | | | |||||| auUUCAAUUUAUGUGCUAGUCa 2 20 140 161 [ce6:III:6024506-6024527:+] 0.4671 123 6 -14.33 -1.0096 MIMAT0000059 cel-miR-86 175853 cyk-3 cugACACCGUUUCGUAAGUGAAu | | ||| || ||||||| uaaUUUUCCAAUGC-UUCACUUc 2 21 183 204 [ce6:III:6024549-6024570:+] 0.4953 154 7 -10.74 -0.5682 MIMAT0000310 cel-miR-254 175853 cyk-3 ggaugucagcgcuuucUAAACGu |||||| ---uaaauaaaucuccAUUUGCu 2 8 1 20 [ce6:III:6024367-6024386:+] 0.6169 120 6 -4.40 -0.1975 MIMAT0000749 cel-lsy-6 175853 cyk-3 gcUUU--ACGCAGAGUAUGUUUu ||| | | |:| |||||| auAAAUCUCCAUUUGCUACAAAa 2 20 4 26 [ce6:III:6024370-6024392:+] 0.6169 122 6 -6.73 -0.1839 MIMAT0004220 cel-miR-785 175853 cyk-3 agauguguuUUGUUAAGUGAAu ||:: ||||||| uaauuuuccAAUGCUUCACUUc 2 14 183 204 [ce6:III:6024549-6024570:+] 0.4953 149 7 -7.25 -0.5964 MIMAT0004227 cel-miR-792 175853 cyk-3 agacuuucaacuucucUAAAGUu |||||| cuguaaauauuuauuuAUUUCAa 2 8 124 146 [ce6:III:6024490-6024512:+] 0.4671 120 6 -5.96 -0.2935

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score cyk-3 RAID00271024 cel-miR-254-3p miRNA MIMAT0000310 cyk-3 mRNA 175853 Prediction 0.1828 cyk-3 RAID00279196 cel-miR-86-5p miRNA MIMAT0000059 cyk-3 mRNA 175853 Prediction 0.2202 cyk-3 RAID00356469 cel-miR-792-3p miRNA MIMAT0004227 cyk-3 mRNA 175853 Prediction 0.1828 cyk-3 RAID00998601 cel-miR-45-3p miRNA MIMAT0000016 cyk-3 mRNA 175853 Prediction 0.2202 cyk-3 RAID01863853 cel-miR-44-3p miRNA MIMAT0000015 cyk-3 mRNA 175853 Prediction 0.2202 cyk-3 RAID01978181 cel-miR-785-3p miRNA MIMAT0004220 cyk-3 mRNA 175853 Prediction 0.1828 cyk-3 RAID02217479 cel-miR-61-3p miRNA MIMAT0000033 cyk-3 mRNA 175853 Prediction 0.2202 cyk-3 RAID02444191 cel-lsy-6-3p miRNA MIMAT0000749 cyk-3 mRNA 175853 Prediction 0.1828 cyk-3 RAID03621258 cel-miR-247-3p miRNA MIMAT0000303 cyk-3 mRNA 175853 Prediction 0.1828