DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 179586 duo-1 acguggacauggACGAAGGUAc | :|||||| ------aaauuaUUUUUCCAUg 2 11 1 16 [ce6:V:11557917-11557932:+] 0.5212 126 6 -11.42 -0.3383 MIMAT0015119 cel-miR-247* 179586 duo-1 ccauuaaucuuuGAAAAGAGAu ||||||||| uuuuccauguuuCUUUUCUCUu 2 11 8 29 [ce6:V:11557924-11557945:+] 0.5174 150 7 -11.74 -0.8018 MIMAT0005523 cel-miR-1022 179586 duo-1 cuaccgcaggauuguuACUAGAa |||||| uaacuuaauuuuucuuUGAUCUa 2 8 138 160 [ce6:V:11558054-11558076:+] 0.5000 120 6 -9.25 -0.3916 MIMAT0006769 cel-miR-1829a 179586 duo-1 uuAUCUCUUUAAGGUUACCAAc | | |||| ||||||| auUCGUCAAAU---AAUGGUUu 2 21 74 92 [ce6:V:11557990-11558008:+] 0.5000 144 7 -7.97 -0.9893 MIMAT0006769 cel-miR-1829a 179586 duo-1 uuaucucuuuAAGGUUACCAAc ||:| |||||| cuuuucucuuUUUCUAUGGUUa 2 13 20 41 [ce6:V:11557936-11557957:+] 0.5174 124 6 -7.36 -0.1136 MIMAT0006776 cel-miR-1834 179586 duo-1 aaccUAGAGUUACCAACUAGAga ||:|: | ||||||| cuuaAUUUU--UCUUUGAUCUau 3 20 141 161 [ce6:V:11558057-11558077:+] 0.5000 128 0 -8.84 -0.1689 MIMAT0011432 cel-miR-2209a 179586 duo-1 acAUCACAUUGGCGACUAGAga || | | :| :|||||| cuUAAU-UUUUCUUUGAUCUau 3 21 141 161 [ce6:V:11558057-11558077:+] 0.5000 126 0 -8.34 -0.1673 MIMAT0000035 cel-miR-63 179586 duo-1 aaAGGUUGAGCGAAGUCACAGUAu | || :|| || | ||||||| caUACACUUCUCUGC-GUGUCAUa 2 23 51 73 [ce6:V:11557967-11557989:+] 0.5068 160 7 -17.50 -0.7881 MIMAT0000036 cel-miR-64 179586 duo-1 aagccauuGCGAAGUCACAGUAu | || | ||||||| auacacuuCUCUGC-GUGUCAUa 2 16 52 73 [ce6:V:11557968-11557989:+] 0.5068 145 7 -15.43 -0.7954 MIMAT0000037 cel-miR-65 179586 duo-1 aagccaAUGCGAAG----UCACAGUAu ||| |||| ||||||| auuucaUACACUUCUCUGCGUGUCAUa 2 18 47 73 [ce6:V:11557963-11557989:+] 0.5068 148 7 -16.94 -0.8197 MIMAT0000038 cel-miR-66 179586 duo-1 agUGUAGGGAUUAGUCACAGUAc || ||:||: | ||||||| acACUUCUCUG--C-GUGUCAUa 2 22 54 73 [ce6:V:11557970-11557989:+] 0.5068 152 7 -19.82 -0.7954 MIMAT0000042 cel-miR-70 179586 duo-1 uaccUUUGUGGUUGCUGCAUAAu || | ||| : |||||| guuaAAUCCCCAUUCCCGUAUUa 2 20 117 139 [ce6:V:11558033-11558055:+] 0.5000 127 6 -10.81 -0.1404 MIMAT0000053 cel-miR-80 179586 duo-1 agccgaAAGUUGAUUACUAGAgu ||: || |||||| acuuaaUUUUUCU-UUGAUCUau 3 18 140 161 [ce6:V:11558056-11558077:+] 0.5000 123 0 -8.29 -0.1673 MIMAT0000054 cel-miR-81 179586 duo-1 ugAUCGAAAGUGCUACUAGAgu || :|||: | |||||| cuUAAUUUUU-CUUUGAUCUau 3 21 141 161 [ce6:V:11558057-11558077:+] 0.5000 134 0 -9.48 -0.1610 MIMAT0000055 cel-miR-82 179586 duo-1 ugaccgAAAGUGCUACUAGAgu |||: | |||||| acuuaaUUUUUCUUUGAUCUau 3 17 140 161 [ce6:V:11558056-11558077:+] 0.5000 132 0 -9.90 -0.1610 MIMAT0000284 cel-miR-229 179586 duo-1 gcuaccuuuucuauugguCACAGUAa ||||||| uuucauacacuucucugcGUGUCAUa 2 9 48 73 [ce6:V:11557964-11557989:+] 0.5068 140 7 -9.11 -0.8304 MIMAT0004227 cel-miR-792 179586 duo-1 agacUUUCAACUUCUCUAAAGUu | :||| :| ||||||| uucuAUGGUUAGAAUGAUUUCAu 2 20 31 53 [ce6:V:11557947-11557969:+] 0.5135 155 7 -11.86 -1.0515

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score duo-1 RAID00722724 cel-miR-82-3p miRNA MIMAT0000055 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID00793883 cel-miR-65-5p miRNA MIMAT0000037 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID01572673 cel-miR-81-3p miRNA MIMAT0000054 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID01625625 cel-miR-64-5p miRNA MIMAT0000036 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID01922598 cel-miR-792-3p miRNA MIMAT0004227 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID02076974 cel-miR-63-3p miRNA MIMAT0000035 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID02437121 cel-miR-80-3p miRNA MIMAT0000053 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID02791371 cel-miR-70-3p miRNA MIMAT0000042 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID02814136 cel-miR-229-5p miRNA MIMAT0000284 duo-1 mRNA 179586 Prediction 0.1828 duo-1 RAID03976491 cel-miR-66-5p miRNA MIMAT0000038 duo-1 mRNA 179586 Prediction 0.1828