DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015119 cel-miR-247* 181577 epn-1 ccauuaaucuuuGAAAAGAGAu :|||||||| aagucuucuuuuUUUUUCUCUu 2 11 615 636 [ce6:X:14815911-14815932:-] 0.4732 146 7 -9.17 -1.1151 MIMAT0000312 cel-miR-257 181577 epn-1 agUGACCCA-UGAGGACUAUGAg ||| || |:|: ||||||| aaACUUUGUAAUUUAUGAUACUu 2 21 168 190 [ce6:X:14816357-14816379:-] 0.4732 159 7 -14.51 -1.1329 MIMAT0000695 cel-miR-353 181577 epn-1 uuaugGUUGUGUACCGUUAAc ||:: |: ||||||| ----aCAGUCCG-GGCAAUUg 2 17 1 16 [ce6:X:14816531-14816546:-] 0.5724 146 7 -15.90 -0.7052 MIMAT0015241 cel-miR-797* 181577 epn-1 uaaagugucuuuGGUUACUUuu | |||||| uauuuuuuuuuuCAAAUGAAua 3 11 784 805 [ce6:X:14815742-14815763:-] 0.4732 122 0 -4.39 -0.1169 MIMAT0005033 cel-miR-1020 181577 epn-1 gacuuucacaguguCUUAUUa |||||| uuuuuuuuucaaauGAAUAAa 2 8 787 807 [ce6:X:14815740-14815760:-] 0.4732 120 6 -4.99 -0.1072 MIMAT0011434 cel-miR-2209c 181577 epn-1 acaucacauuggccACCAGAAAa |||||||| acaguccgggcaauUGGUCUUUa 2 10 1 23 [ce6:X:14816524-14816546:-] 0.5724 145 7 -16.93 -1.2472 MIMAT0011444 cel-miR-2214 181577 epn-1 uuGC-GGCCAGUUCAA--CAAC-AGUUAc || ::| | ||||| |||| ||||| uaCGAUUGAUGAAGUUGAGUUGUUCAAUu 2 24 480 508 [ce6:X:14816039-14816067:-] 0.4732 133 0 -16.14 -0.5958 MIMAT0011454 cel-miR-2209b 181577 epn-1 acuucGUG-UUGGCGAGUA-GAGa ||| |||: |||| ||| aucccCACUAACUUGUCAUCCUCc 2 18 284 307 [ce6:X:14816240-14816263:-] 0.4732 120 0 -13.28 -0.7438 MIMAT0011460 cel-miR-2219 181577 epn-1 gaAGUCGAAAGGGAGCGU-GAAGc ||| : |: :|:||| |||| ugUCAUUGCUUGUUUGCAUCUUCu 2 22 253 276 [ce6:X:14816271-14816294:-] 0.4732 121 0 -14.39 -0.1518 MIMAT0011461 cel-miR-2220* 181577 epn-1 cuauuuaucaaauACCAGAAug ||||||| caguccgggcaauUGGUCUUua 3 10 2 23 [ce6:X:14816524-14816545:-] 0.5724 125 0 -9.30 -0.1129 MIMAT0000001 cel-let-7 181577 epn-1 uuGAU-AUGUUGGAUGAU-GGAGu ||| |:||| | ||| |||| auCUAUUGCAAGC--CUAUCCUCc 2 21 221 242 [ce6:X:14816305-14816326:-] 0.4732 120 0 -16.60 -0.5540 MIMAT0000019 cel-miR-48 181577 epn-1 agcGUAGAUGAC--UCGGAU-GGAGu :|||||:|| |||||| |||| uuaUAUCUAUUGCAAGCCUAUCCUCc 2 21 217 242 [ce6:X:14816305-14816330:-] 0.4732 143 0 -26.07 -0.5929 MIMAT0000020 cel-miR-49 181577 epn-1 agACGUCGAAGAGCACC-ACGAa | :| :||||: ||| |||| ucUUUAUUUUCUU-UGGUUGCUu 2 21 633 654 [ce6:X:14815893-14815914:-] 0.4732 122 0 -16.32 -0.9648 MIMAT0000056 cel-miR-83 181577 epn-1 aauGACUUAAAUAUACC-ACGAu :| | ||| | ||| |||| cucUUUAUUUUCUUUGGUUGCUu 2 20 632 654 [ce6:X:14815893-14815915:-] 0.4732 123 0 -10.67 -0.9853 MIMAT0000057 cel-miR-84 181577 epn-1 auguuAUAAUGUAU-GAU-GGAGu ||||:|| : ||| |||| auaucUAUUGCAAGCCUAUCCUCc 2 18 219 242 [ce6:X:14816305-14816328:-] 0.4732 124 0 -12.09 -0.5965 MIMAT0000058 cel-miR-85 181577 epn-1 cgUGCUGAAAAGUUUAUGAAACAu | ||: |:|| ||||||| cgAAGAUAAAUUAA--ACUUUGUa 2 23 156 177 [ce6:X:14816370-14816391:-] 0.4732 147 7 -11.66 -1.2053 MIMAT0000297 cel-miR-241 181577 epn-1 agUAAAGAGCGU--GGAU-GGAGu || | |:||| |||| |||| auAUCUAUUGCAAGCCUAUCCUCc 2 20 219 242 [ce6:X:14816305-14816328:-] 0.4732 126 0 -16.07 -0.5929 MIMAT0000308 cel-miR-252 181577 epn-1 aauggacgccgUGAUGAUGAAUa ||| ||||| | aaauuaacacaACUUCUACUGAa 2 13 758 780 [ce6:X:14815767-14815789:-] 0.4732 120 0 -7.29 -0.1202 MIMAT0000697 cel-miR-355 181577 epn-1 guaucGAGUCCGAUUUUGUUu | || :|||||||| gacuuCCCACAUUAAAACAAa 2 17 732 752 [ce6:X:14815795-14815815:-] 0.4732 152 7 -9.06 -1.1322 MIMAT0004232 cel-miR-797 181577 epn-1 agaagagUAA-CACUAACGACACUau ||| || || |||||| ccgggcaAUUGGUCUUUACUGUGAaa 3 19 6 31 [ce6:X:14816516-14816541:-] 0.5724 137 0 -11.21 -0.1591

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score epn-1 RAID00060612 cel-miR-85-3p miRNA MIMAT0000058 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID01299313 cel-miR-84-5p miRNA MIMAT0000057 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID01571561 cel-let-7-5p miRNA MIMAT0000001 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID01730769 cel-miR-83-3p miRNA MIMAT0000056 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID02140385 cel-miR-56-5p miRNA MIMAT0000027 epn-1 mRNA 181577 CLIP-seq 0.5483 epn-1 RAID02170447 cel-mir-2953 miRNA MI0013633 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID02267833 cel-miR-48-5p miRNA MIMAT0000019 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID02267847 cel-miR-797-5p miRNA MIMAT0004232 epn-1 mRNA 181577 CLIP-seq//Prediction 0.6308 epn-1 RAID02834907 cel-miR-241-5p miRNA MIMAT0000297 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID02836192 cel-miR-355-5p miRNA MIMAT0000697 epn-1 mRNA 181577 Prediction 0.2202 epn-1 RAID03162315 cel-miR-50-5p miRNA MIMAT0000021 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID03364769 cel-miR-49-3p miRNA MIMAT0000020 epn-1 mRNA 181577 Prediction 0.1828 epn-1 RAID03424773 cel-miR-252-5p miRNA MIMAT0000308 epn-1 mRNA 181577 Prediction 0.2202 epn-1 RAID03558309 cel-miR-90-3p miRNA MIMAT0000061 epn-1 mRNA 181577 Prediction 0.2202 epn-1 RAID03869005 cel-miR-62 miRNA MIMAT0000034 epn-1 mRNA 181577 Prediction 0.1828