DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015094 cel-miR-37* 181756 kin-25 cguGGCGUUGCCU---GUGGGUGu ::|| |: || :|||||| acuUUGCCAUUGAUGUUACCCACu 2 19 267 290 [ce6:X:17193156-17193179:+] 0.5114 129 6 -18.14 -0.1033 MIMAT0015096 cel-miR-46* 181756 kin-25 gacaguuaucugcCGAGAGAa ||||||| uuuuccgccucucGCUCUCUc 2 9 33 53 [ce6:X:17192922-17192942:+] 0.5114 140 7 -11.49 -0.4804 MIMAT0015097 cel-miR-47* 181756 kin-25 ugacaguuaucuGA-CGAGAGAa || ||||||| cuuuuuccgccuCUCGCUCUCUc 2 11 31 53 [ce6:X:17192920-17192942:+] 0.5114 141 7 -12.28 -0.4804 MIMAT0015102 cel-miR-60* 181756 kin-25 uaaaauaccGUGAGAAG-GUCAa ||||:||| |||| ccuuccccuCACUUUUCUCAGUu 2 14 216 238 [ce6:X:17193105-17193127:+] 0.5114 125 0 -17.15 -0.9083 MIMAT0015115 cel-miR-239b* 181756 kin-25 aaaaACGUGUGGUGUUUUCACg ||: ::: |: |||||| ucagUGUUUGUAAUUAAAGUGa 2 19 153 174 [ce6:X:17193042-17193063:+] 0.5114 122 6 -9.72 -0.1544 MIMAT0015119 cel-miR-247* 181756 kin-25 ccauuaaucuuugAAAAGAGau ||||||| cucuuuuuuuuugUUUUCUCau 3 10 175 196 [ce6:X:17193064-17193085:+] 0.5114 125 0 -5.69 -0.1254 MIMAT0000328 cel-miR-272 181756 kin-25 guuugugggUACGGAUGu |||||||: acuuuuuuaAUGCCUAUg 2 10 288 305 [ce6:X:17193177-17193194:+] 0.5114 129 0 -9.77 -0.3029 MIMAT0004233 cel-miR-798 181756 kin-25 agucAGUUAUACAU-UCCGAAu |::| ||||| |||||| aacaUUGA-AUGUAUAGGCUUu 2 18 90 110 [ce6:X:17192979-17192999:+] 0.5114 127 6 -13.01 -0.4057 MIMAT0005522 cel-miR-1021 181756 kin-25 ggcuccuaaAGUGUACUAGAGUGAa || |: ||||||| uuuuccgccUCUCGCUCUCUCACUc 2 17 33 57 [ce6:X:17192922-17192946:+] 0.5114 144 7 -17.29 -0.3712 MIMAT0011458 cel-miR-2218b* 181756 kin-25 agAGUGAU-GUUUGAUGU-UUAAa |:|||| :|: :|||| |||| uuUUACUAGUAGCUUACAUAAUUc 2 21 128 151 [ce6:X:17193017-17193040:+] 0.5114 131 0 -11.66 -0.8061 MIMAT0000004 cel-miR-2 181756 kin-25 cguguAGUUUCGACCGACACUAu ||| | ||||||| cucucUCACUCAUUUCUGUGAUa 2 19 47 69 [ce6:X:17192936-17192958:+] 0.5114 142 7 -15.53 -1.2081 MIMAT0000014 cel-miR-43 181756 kin-25 cgcugucguucauuuGACACUAu ||||||| cucucucacucauuuCUGUGAUa 2 9 47 69 [ce6:X:17192936-17192958:+] 0.5114 140 7 -11.16 -1.2065 MIMAT0000058 cel-miR-85 181756 kin-25 cgugcUGAAA--AGUUUA-UGA-AACAu ||||| |||: | ||| |||| cccucACUUUUCUCAGUUAACUGUUGUc 2 20 221 248 [ce6:X:17193110-17193137:+] 0.5114 125 0 -10.87 -1.0190 MIMAT0000285 cel-miR-230 181756 kin-25 agaggaccagcgugUUGAUUAUg |||||||: -------gccaagaAACUAAUGu 2 10 1 16 [ce6:X:17192890-17192905:+] 0.5114 129 0 -8.51 -0.2510 MIMAT0000293 cel-miR-238 181756 kin-25 agACUUACCGUAG-CCUCAUGUUu | | || ::|| ||||||| guUAACUGUUGUCAAAAGUACAAg 2 22 236 259 [ce6:X:17193125-17193148:+] 0.5114 148 7 -13.94 -0.8027 MIMAT0000294 cel-miR-239a 181756 kin-25 ggUC-AUGGAUACACA----UCAUGUUu || || ||:| ||| ||||||| ucAGUUAACUGU-UGUCAAAAGUACAAg 2 22 233 259 [ce6:X:17193122-17193148:+] 0.5114 149 7 -19.24 -0.8135 MIMAT0000295 cel-miR-239b 181756 kin-25 gucaUGAAAACA--CAUCAUGUUu ||| |||| ||||||| guuaACUGUUGUCAAAAGUACAAg 2 19 236 259 [ce6:X:17193125-17193148:+] 0.5114 153 7 -13.70 -0.8063 MIMAT0000306 cel-miR-250 181756 kin-25 acgguuGUCAACUGACACUAa || || ||||||| cucacuCAUUU--CUGUGAUa 2 16 51 69 [ce6:X:17192940-17192958:+] 0.5114 144 7 -9.79 -1.1925 MIMAT0004216 cel-miR-255 181756 kin-25 gacauuuuUUAGAGAAGUCAAa | |:|: |||||| uuccccucACUUUUCUCAGUUa 2 15 218 239 [ce6:X:17193107-17193128:+] 0.5114 122 6 -7.93 -0.1083 MIMAT0004232 cel-miR-797 181756 kin-25 agaAGAGUAACACUAACGACACUAu ||||| | ||| ||||||| cucUCUCA--CUCAUUUCUGUGAUa 2 23 47 69 [ce6:X:17192936-17192958:+] 0.5114 163 7 -17.23 -1.2081

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score sid-3 RAID00455621 cel-miR-239b-5p miRNA MIMAT0000295 sid-3 mRNA 181756 Prediction 0.2202 sid-3 RAID00683302 cel-miR-238-3p miRNA MIMAT0000293 sid-3 mRNA 181756 Prediction 0.2202 sid-3 RAID01070350 cel-miR-230-3p miRNA MIMAT0000285 sid-3 mRNA 181756 Prediction 0.1828 sid-3 RAID01152053 cel-miR-255-3p miRNA MIMAT0004216 sid-3 mRNA 181756 Prediction 0.1828 sid-3 RAID01284368 cel-miR-239a-5p miRNA MIMAT0000294 sid-3 mRNA 181756 Prediction 0.2202 sid-3 RAID01501824 cel-miR-85-3p miRNA MIMAT0000058 sid-3 mRNA 181756 Prediction 0.1828 sid-3 RAID02113357 cel-miR-250-3p miRNA MIMAT0000306 sid-3 mRNA 181756 Prediction 0.2202 sid-3 RAID02434801 cel-miR-2-3p miRNA MIMAT0000004 sid-3 mRNA 181756 Prediction 0.2202 sid-3 RAID02916641 cel-miR-228-5p miRNA MIMAT0000283 sid-3 mRNA 181756 Prediction 0.1828 sid-3 RAID03512924 cel-miR-43-3p miRNA MIMAT0000014 sid-3 mRNA 181756 Prediction 0.2202 sid-3 RAID03738892 cel-miR-797-5p miRNA MIMAT0004232 sid-3 mRNA 181756 Prediction 0.2202