DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015119 cel-miR-247* 178057 klp-12 ccauuaaucuuUGAAAAGAGAu |||||||| | uaccccuuuucACUUUUCUGUa 2 12 35 56 [ce6:IV:11341358-11341379:-] 0.5871 123 0 -9.88 -0.1699 MIMAT0000313 cel-miR-258 178057 klp-12 uuuuCCUAAGGAGAGUUUUgg | || :|:|||||| --uuGUAUCAUUUUCAAAAaa 3 18 1 19 [ce6:IV:11341395-11341413:-] 0.6129 133 0 -7.30 -0.5039 MIMAT0015241 cel-miR-797* 178057 klp-12 uaaAGUGUCUUUG--GUUACUUUu |||:| | |: ::|||||| aucUCAUAAAUAUUGUGAUGAAAu 2 20 78 101 [ce6:IV:11341313-11341336:-] 0.5871 138 6 -7.38 -0.2416 MIMAT0006772 cel-miR-1830 178057 klp-12 cggaucuuuugcacUUUGGAGc |||:||| uuuuuagugcccaaAAAUCUCa 2 9 62 83 [ce6:IV:11341331-11341352:-] 0.5871 124 0 -8.55 -0.1045 MIMAT0011450 cel-miR-1832b 178057 klp-12 uagucgcuUAGCGA-GACGGGUga ||: :| |||||| uguaauuuAUUUUUAGUGCCCAaa 3 16 53 76 [ce6:IV:11341338-11341361:-] 0.5871 122 0 -13.61 -0.3775 MIMAT0011463 cel-miR-2221 178057 klp-12 ugaucgccagaccauAGUGAAc |||||| caaaaaaaaaaguuuUCACUUg 2 8 13 34 [ce6:IV:11341380-11341401:-] 0.6129 120 6 -10.44 -0.2683 MIMAT0011463 cel-miR-2221 178057 klp-12 ugaucgccagaccauAGUGAAc |||||| cacuuguaccccuuuUCACUUu 2 8 29 50 [ce6:IV:11341364-11341385:-] 0.5871 120 6 -6.32 -0.1236 MIMAT0014446 cel-miR-2953-5p 178057 klp-12 uaaaagugcuUGUGAAGACAu || :|||||| accccuuuucACUUUUCUGUa 2 12 36 56 [ce6:IV:11341358-11341378:-] 0.5871 131 6 -14.63 -0.4161 MIMAT0000004 cel-miR-2 178057 klp-12 cgUGUAGUUUCGACCGACACUAu |: ||| | | :|||||| aaAUCUCAUAAAU-AUUGUGAUg 2 22 76 97 [ce6:IV:11341317-11341338:-] 0.5871 131 6 -10.12 -0.2250 MIMAT0000014 cel-miR-43 178057 klp-12 cgcugucGUUCAUUUGACACUAu || | |:|||||| aaaaucuCAUAAAUAUUGUGAUg 2 17 75 97 [ce6:IV:11341317-11341339:-] 0.5871 132 6 -11.45 -0.2270 MIMAT0000049 cel-miR-77 178057 klp-12 accugucgauaccggACUACUu |||||| aucucauaaauauugUGAUGAa 2 8 78 99 [ce6:IV:11341315-11341336:-] 0.5871 120 6 -8.05 -0.3607 MIMAT0000059 cel-miR-86 178057 klp-12 cugacaccgUUUCGUAAGUGAAu ||||: ||||||| ucaaaaaaaAAAGUUUUCACUUg 2 15 12 34 [ce6:IV:11341380-11341402:-] 0.6129 158 7 -13.04 -1.2271 MIMAT0000059 cel-miR-86 178057 klp-12 cugacaccguuucguAAGUGAAu ||||||| ucacuuguaccccuuUUCACUUu 2 9 28 50 [ce6:IV:11341364-11341386:-] 0.5871 140 7 -8.39 -1.1810 MIMAT0000286 cel-miR-231 178057 klp-12 aagacggACAAC--UAGUGCUCGAAu || || || | |||||| aauauugUGAUGAAAUAAAGAGCUUa 2 18 86 111 [ce6:IV:11341303-11341328:-] 0.5871 124 6 -14.40 -0.5001 MIMAT0000306 cel-miR-250 178057 klp-12 acGGUUGUCAACUGACACUAa |: |:| | |:|||||| auCUCAUAAAU-AUUGUGAUg 2 20 78 97 [ce6:IV:11341317-11341336:-] 0.5871 133 6 -8.26 -0.2291 MIMAT0004220 cel-miR-785 178057 klp-12 agaUGUGUUUUGUUAAGUGAAu | | |||| ||||||| caaAAAAAAAAGUUUUCACUUg 2 20 13 34 [ce6:IV:11341380-11341401:-] 0.6129 155 7 -9.53 -1.2229 MIMAT0004220 cel-miR-785 178057 klp-12 agauguguuuuguuAAGUGAAu ||||||| cacuuguaccccuuUUCACUUu 2 9 29 50 [ce6:IV:11341364-11341385:-] 0.5871 140 7 -10.52 -1.1828 MIMAT0004222 cel-miR-787 178057 klp-12 gcuuuCUAUGAUUUUGCUCGAAu |||: | || |||||| auuguGAUGAAAUAAAGAGCUUa 2 19 89 111 [ce6:IV:11341303-11341325:-] 0.5871 130 6 -13.23 -0.5105 MIMAT0004226 cel-miR-791 178057 klp-12 acgGAAUAGACGCCUCACGGUUu :||||:| : |||||| | uaaUUUAUUUUU--AGUGCCCAa 2 21 55 75 [ce6:IV:11341339-11341359:-] 0.5871 125 0 -12.56 -0.2714 MIMAT0004227 cel-miR-792 178057 klp-12 agacuuucaacUUCUCUAAAGUu || || ||||| uuuucaaaaaaAAAAGUUUUCAc 2 13 9 31 [ce6:IV:11341383-11341405:-] 0.6129 120 0 -3.58 -0.1719 MIMAT0004232 cel-miR-797 178057 klp-12 agaAGAGUAACACUAACGACACUAu ||||| | | | :|||||| aaaUCUCA---UAAAUAUUGUGAUg 2 23 76 97 [ce6:IV:11341317-11341338:-] 0.5871 138 6 -15.00 -0.2291

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score klp-12 RAID00492716 cel-miR-792-3p miRNA MIMAT0004227 klp-12 mRNA 178057 Prediction 0.1828 klp-12 RAID00974546 cel-miR-86-5p miRNA MIMAT0000059 klp-12 mRNA 178057 Prediction 0.2202 klp-12 RAID01587545 cel-miR-250-3p miRNA MIMAT0000306 klp-12 mRNA 178057 Prediction 0.1828 klp-12 RAID02054677 cel-miR-785-3p miRNA MIMAT0004220 klp-12 mRNA 178057 Prediction 0.1828 klp-12 RAID02083060 cel-miR-77-3p miRNA MIMAT0000049 klp-12 mRNA 178057 Prediction 0.2202 klp-12 RAID02350880 cel-miR-791-3p miRNA MIMAT0004226 klp-12 mRNA 178057 Prediction 0.1828 klp-12 RAID02462685 cel-miR-787-3p miRNA MIMAT0004222 klp-12 mRNA 178057 Prediction 0.1828 klp-12 RAID02875086 cel-miR-797-5p miRNA MIMAT0004232 klp-12 mRNA 178057 Prediction 0.2202 klp-12 RAID03019890 cel-miR-231-3p miRNA MIMAT0000286 klp-12 mRNA 178057 Prediction 0.1828 klp-12 RAID03380444 cel-miR-2-3p miRNA MIMAT0000004 klp-12 mRNA 178057 Prediction 0.1828 klp-12 RAID03750265 cel-miR-43-3p miRNA MIMAT0000014 klp-12 mRNA 178057 Prediction 0.1828